Tigriopus californicus (tidepool copepod): 131885881
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Entry
131885881 CDS
T09700
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 12-like
KO
K20309
trafficking protein particle complex subunit 12
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131885881
Membrane trafficking [BR:
tcf04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
131885881
BRITE hierarchy
Motif
Pfam:
TPR_19
TPR_2
TPR_12
TPR_1
TPR_8
TPR_16
TPR_14
ANAPC3
RPN7
TPR_11
TPR_15
SNAP
TPR_7
TPR_4
Motif
Other DBs
NCBI-GeneID:
131885881
NCBI-ProteinID:
XP_059090049
LinkDB
All DBs
Position
8:13570922..13577467
Genome browser
AA seq
1049 aa
AA seq
DB search
MDSRSARSRTNSSSSLRSPGPQALTPSHTPNPGFTRSGGHFYGPSPLSPDQLAAGISRIR
AERGSRSSSIPATPAPTPNPLLHVTYHMIPEQLAAGINSLRVDEGYVDSTSFPGTPAPSP
FSPSPAQFPRFTPDQVAEGIKRLREESGVSGSSTGQPPTPSTTPGLGVIAPIHQPLGIIP
EHLVESIQHLRKDEGLESASNPSTPIPTPISPSPATKNPVLPEQIAAGIHRLKAEEGMSS
GGSSGFPSTPAPTPFIHHHPGGVRPEDLAAGISRLYVIEEGRVPSVSTPVNSFEQKSEFT
MASNEESGSDPGKPDLSSYFGGESAPIVTAEASVQSTSATNFFDQLEESSMSVLQSCRES
RVDLSQIEIANQQPSPPEDTHLEAQLDVIEQRHDDVQSLRRRQMSESLDRKSSSDEQQQQ
QPQQELELEQTEGGEPMSEQPSLCTIFGETKDSADPFSSITKEEEDLFKAPKTVALDKEK
KKLPDSLNLKPNVQVAISEVSTPTNTAPSSTYATPVAPTPKGDHSDPMNFSNASFLTSTP
APPGQLQSGAAVLLQASTSHFQTDQPITSPLPLSPAASNFVPQFNSSASIDESLILPDDE
IVPEPLTKADKEDNRRHEAWIPKQATGQILSSIDASNPGTFYPDRSSLTRPCVVIREDLV
DPVKNLVAHYRGETETQKRQVLTVETVTRDQKGLRQLVRAGCFRAAVNLTGRLLQMYNQG
TGQSGDSSSMAKHTPSSLQIWFARISLLVKLRQFSIAELETTAFGDLDRPDLYFQFYSGM
YPNRRGSMVPFAFRILIAEIPQYLGKYHETLDRLYALLATVKKIQDNLLKGKAEDGSKCQ
FSESDRLASQALWRKREIRVLYSLANSSIIQRDFESAITNLEILLEVEDTKLSAKILSAM
GRVYLQLGDIREAETLFSRAFKAQTDNSTEEKVDHLVDLAHLSIGNSDFPNALNHFKKAD
DLNPDNPTVMNNIALCHIYCGSLKEGLDYLEARITRKPHLILHETVILNLCTIYELESSY
ASQKKRAILDLVSQYKGDGINAACLKLQM
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggacagtaggagtgctcgcagtcggacgaattcatccagctccctcagatcccccggt
ccccaagctctcacgccctcacacacgcccaatcccggattcactaggagtggtggacac
ttttacggcccatctccgctctctcccgatcaattagcggcggggatctcgcgaatcagg
gccgagcgaggatccagaagctcctccatccctgccacccccgctcccacgcccaatccg
ttactacatgtcacttatcatatgatcccagaacaattggcagcaggcattaacagtctt
agagtggacgagggctacgtggacagcaccagttttccaggcacgcctgctccttctccg
ttcagtccctcgccggctcaattcccacggtttacgcccgatcaagttgccgaagggatc
aagcgcttacgagaggagagtggagtcagcggttcgagcaccggtcaacctcccactcca
tccaccacaccgggattgggtgtgatcgcaccgattcatcaaccactgggtatcattccc
gagcatctggtggagagcatccagcacttgagaaaagacgagggactagaaagcgcgtcc
aacccgtcgaccccgattcccacccccatatccccatctccagccacgaaaaatccggtt
ctcccggaacaaatcgcggcggggattcatcggctcaaggccgaggaaggtatgtccagt
ggtggaagttcgggcttcccatccacacccgctcccactccatttattcatcatcaccca
gggggagtccgccccgaggatttggctgcaggaatatcgagactttacgttatcgaagaa
ggtcgagtcccctcggtgtccacccccgtgaattcgtttgagcagaaaagtgagttcacc
atggcttccaatgaagagagtggtagtgatccggggaagccggacttgagctcctatttt
gggggtgaatcggctcccattgtgacggcagaagcgagtgtccaatcgacgtcggcgacg
aacttctttgatcagttagaggaatcgtccatgtctgtgctacaaagttgccgtgaaagt
cgggttgatttgagccaaattgagattgcgaaccaacagccttcccctcccgaagacact
cacttggaggctcaattggatgtaattgagcagagacatgacgacgttcaaagtctacga
cgtcggcaaatgagtgagtctttggataggaaatccagttctgatgagcaacaacagcaa
caaccgcaacaagaactggaactagaacaaacggaaggaggggagccaatgtctgaacag
ccctcgctctgtacgatatttggggaaacgaaagacagcgcggaccctttttcctcgata
acgaaagaagaggaagatttgttcaaagcacccaagactgtggcgcttgataaggaaaag
aagaagcttccggacagtcttaacttgaagcctaatgtccaagttgccatatctgaagtg
tccacaccgaccaatacggctcccagctccacgtacgccacaccagtggctcccactccc
aagggcgatcattcagatcccatgaacttctccaacgcttccttcctgacttcaacgcca
gcccctccgggtcaattacaatccggtgctgccgtcttgttgcaagcatctacgtctcat
ttccaaacggaccaacccatcacgagcccgttgcctttaagtccggcagcctcgaatttc
gttcctcaatttaatagctcggcctccatcgacgagagtctgatccttccggatgacgag
attgtgcccgagcctttgacaaaagccgacaaagaggacaatcgccgtcatgaggcatgg
attcctaagcaagcaactggccagatcttgtcaagtattgacgcttctaaccctggaacg
ttctatccggatcgcagctcattgactcgaccgtgtgttgtgattcgagaggatctggtg
gatcccgtcaaaaatctcgtagctcactacagaggtgagactgagacgcagaagaggcag
gtcctcaccgtggaaaccgtaactagagatcaaaaagggttgcggcaattagttcgagcc
ggttgcttccgagcggccgtcaatttgaccggacgattgcttcaaatgtacaaccaaggc
acaggacaatccggagactcatcgagtatggctaaacataccccatcgtcattacagatt
tggttcgcgaggatcagtttattggtgaaattgcgccagttctcgattgccgagcttgag
accacggcgtttggagacttggatcggccggatctttactttcagttctactcgggcatg
taccctaatcggaggggatcaatggttccattcgcatttcggattctcatcgccgaaatc
cctcaatatttgggcaaatatcacgagactcttgaccgactctacgcccttttggccact
gtcaaaaagatccaggataacctgctcaaaggcaaggccgaagacggatccaagtgtcaa
ttcagcgaatcggatcgtcttgcttctcaggcgttgtggcggaaacgagaaatccgagtg
ctctattcgcttgccaatagctcaatcatccagagagacttcgagtctgctatcaccaat
ttggagattctcctggaggtcgaggacacgaaattgtcagcgaaaattctgtctgccatg
ggccgagtatatttgcaactaggcgatattcgcgaggcagagaccctcttctcgagggcg
ttcaaggctcagacagataattccaccgaagagaaggtcgaccaccttgtggacttggca
catttgtccattggcaactcagacttccccaatgcattaaatcatttcaagaaagccgat
gacttgaatccggacaatccaactgtgatgaacaacattgctctctgtcacatttattgt
ggcagtctcaaggaaggcttggactatttagaggcccggatcacgcgtaagccgcatttg
atcctacacgagaccgtgatcttgaatctatgcaccatctacgaactcgaatcgtcctat
gccagtcagaagaaacgagccatcctcgatttggtcagccaatataaaggcgatggaatc
aacgcggcgtgtttgaagctgcaaatgtaa
DBGET
integrated database retrieval system
