Tigriopus californicus (tidepool copepod): 131885887
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Entry
131885887 CDS
T09700
Name
(RefSeq) syntaxin-12-like isoform X1
KO
K13813
syntaxin 12/13
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
131885887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131885887
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131885887
Membrane trafficking [BR:
tcf04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
131885887
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131885887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
Synaptobrevin
PigL_N
DUF6988
Fez1
NNH7
ETRAMP
FUSC
HFX_2341_N
Syntaxin
Motif
Other DBs
NCBI-GeneID:
131885887
NCBI-ProteinID:
XP_059090058
LinkDB
All DBs
Position
8:complement(2433357..2503066)
Genome browser
AA seq
268 aa
AA seq
DB search
MMAMDSYQNGAVTDTEFQRLAQTIGTNIQKILQNVSSIQRMIAQIGTPQDNQQFQQQLHQ
IQHYTGQLAKDTSKHLKDLNNFSGEQRQWRLQKERLHNDFTKALNSFQAAQRTAAQREKE
VIKRAKAASGINALAAPGAQGNLIDVEEGSLGNDTTMGQSKTQMLLEEEANIEQLQEREK
SIRQLESDIVDVNTIFKDLATMVHEQGEMVDSIEANVESTSVRVHEGTEQLRQAETYKNK
TRKKKLILAIIGVIILIIVIAVIWSSLS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgatggccatggattcttaccagaacggtgccgtgactgacaccgaattccaacgattg
gctcaaaccatcgggaccaacattcaaaagatcttgcaaaatgtgtcctccattcaaagg
atgattgctcagattggcacccctcaagacaatcaacaatttcaacaacagctacatcag
atccaacattacactggtcagttggccaaggacacgtccaagcatttgaaggatctgaac
aacttcagcggtgaacaacgtcagtggcggctccagaaagagcggctccataatgacttc
accaaagccttgaacagcttccaagctgctcaaaggacggccgctcaacgagagaaggaa
gtcatcaagagggcaaaggccgccagtggcatcaatgctctggctgcgcctggcgcccaa
ggaaatctgattgacgtggaagaaggctccttgggaaatgacactaccatgggtcagagc
aagactcaaatgctcttggaggaagaggccaacattgagcaactgcaagaaagagaaaag
tcgatccgccaattggagtcggatatcgtggacgtgaacaccatcttcaaggatttagcc
accatggtccacgagcaaggagaaatggtcgattcgattgaggctaacgttgaatccacc
tcggtccgtgtccacgaggggactgaacaactccgacaagccgaaacttacaaaaataag
actcgcaagaagaagctgattttggccattattggagtgattattttgatcattgtcatt
gctgtcatctggtcgtctctatcttga
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integrated database retrieval system
