Tigriopus californicus (tidepool copepod): 131885962
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Entry
131885962 CDS
T09700
Name
(RefSeq) cytoplasmic aconitate hydratase-like
KO
K22416
iron-responsive element-binding protein 2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131885962
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131885962
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
131885962
NCBI-ProteinID:
XP_059090159
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All DBs
Position
8:complement(10192376..10196284)
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AA seq
1056 aa
AA seq
DB search
MEASPDQAQPAEPLLRVEEARFDLDGKTYRYFPVPQALPLDQYERLPYALRVLAECMVRQ
AAQNAGGHGSIWRQSLSKLLAYRAHEGADILFQPGRVLLQDFTGVPALLDMAALRDLVAE
RCGPAASRRVDSLCPADLVVDHTVQIDYSQVQSLRKPKQSALSGGATGPAVDSGLVSSLN
GLNLDASCPPPPPPPAIIVHSNYPPTPTPVPTMYSTYNGYAYPSPYYGPVAPPPAQFYSL
APAFHSYGPANLSGPVPAAVPNMVQPSFAPPTPTVDSVPHDNPGLPIQDEICPFHQRHTY
WAELLRKNQAKEFRKNEERFAFLKWVNKSFGNITVIPPGTGVMHQVNLEYLARIVTCQDG
LLFPDSLIGTDSHTTMINGLGVLGWGVGTLDAESVMFGHPITMTIPKVVGCRISGQIPDY
TTSTEIVLLITKKLRHAGVNGCFVEFFGPSLEVLSMADRATIANMSPEYGALVSYFPYDE
LTLDYLQHAGRSAQVECIRKYLTEVGMLRTPQSKEPEYSEVLEIDLSEVQPCVSGPKRSK
DKVLIHEIGSDFHKALIAHQDSSKGFGLTLEQTYTSLNVNVDGAFHTITNGSVLLAAITS
CSNTSNPSVLLGAGVLAKKAIEAGLAVSKCVKTSLAPGSGVVTSYLLESGVMPYLYMLGF
EVIGYGCSSCVDNTKPLPGPIVDAIRQGSLVCCGVMSGNRNFESRVQADIKANYLASPML
VIAYSIAGRVDIDFEREPIGFTAEGKPIFLSEVWPSRQEIQEMENRFVIPAIFRNVVGRI
SYGNKHWSALETAESDLHFPWDQSSTFIKPPLYITELAENLPETPKSWLKGMRCLLKLGD
NVTSDHISPAGSIVRNSPAADYLSSLGLAPREYSSYGARRGNCEVMMRGTFGHIRLKNEL
SKKEGPFTTHLPSGVPTTIFEASQRYKVEKVPLFVIAGENFGRGTARDWATKGPLLLGVK
AILALSFDSNYRANLVKSGILPVQIDRTTYEILTGREILDIELPESEEDEQLKVSLVLNH
DFDISADLRLDNEYEKSLYQDGGVIRQKMRDLVAES
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtcaccagatcaggcccaaccggctgaacctcttctcagggtcgaggaggcc
cgctttgacctcgatggcaagacctatcgctattttcccgtgccgcaagccttgcccctg
gaccagtatgaacggctaccctatgccctccgcgtcctagccgaatgtatggttcgtcag
gcggcccagaatgcgggtggtcacggctccatttggcggcaatcgctgagcaagctcctg
gcttatcgagcccacgaaggggccgatattttattccagcctggacgcgtcttgttgcag
gattttaccggggtacccgcattgctggatatggctgccctgcgggatttagtcgccgag
cgctgtggaccggcagcttcccgccgggtagattcgttatgcccggccgatttagtggtg
gaccacacggttcaaatcgattacagtcaagtgcaaagtttgcgtaagcccaaacaatca
gcccttagtggcggtgccacgggtccggccgtggattccggcctggtctcttccttgaat
ggcttgaacttggatgcatcgtgtccaccacccccgccgcctccggccattatcgttcat
tcgaactacccaccgactccgacccccgtacccaccatgtattcgacgtacaacggatac
gcctatccctcgccatattatggacctgtggccccacccccggctcagttttattccctg
gctcccgcttttcactcatacgggccggccaatttgagcggccctgtgccggcggccgta
cccaatatggttcaaccttcatttgcgccccctacgccgacggtcgacagtgtgccgcac
gataacccgggccttcccattcaagacgaaatctgtccgtttcaccaacgtcacacctat
tgggccgaactcctgcgcaagaatcaggccaaagagtttcgcaagaatgaggagcgcttt
gcgtttttgaaatgggtgaacaagtcgtttggcaatatcacggtaattcccccgggcacg
ggcgttatgcatcaagtgaacctggaatatctggcccgcattgtcacgtgtcaagatggt
ctgctcttccccgactcgctgatcggcaccgactcgcacaccaccatgatcaatggctta
ggcgtcttgggttggggtgtgggcactttggatgcggaatccgttatgttcggccatccc
attaccatgaccattcccaaggtggttggctgccgtatctcgggccagattcctgattac
acaacctccaccgagattgtcttgctaataactaagaaacttcgtcacgcaggtgtgaac
ggatgctttgtcgagttcttcggtccgagtttggaagtgttatccatggccgatcgtgct
accatcgccaatatgtcgccagaatacggcgccttggtcagctattttccgtatgacgaa
ctaaccctggattacctacaacatgctgggcgatcggctcaagttgagtgcattcgaaaa
tacctgactgaggtaggtatgttgcggactccccagtcgaaagagcccgaatactccgag
gtattggaaatcgatctctctgaggtgcaaccctgtgtatccgggcccaaacgatccaag
gacaaggtgttgattcacgaaatcgggagtgatttccacaaagccctgatcgcacatcaa
gactcaagcaaaggcttcggcttgacccttgaacaaacgtacacttccttgaatgtgaat
gtggatggagccttccacaccatcaccaatggttcggttctattggccgccatcacatcg
tgttcaaacacaagcaatccctccgtgttgctgggagcgggtgtcttagccaagaaagcc
atcgaagctggtttggcggtttcaaaatgcgtgaaaacaagcttggcccccgggagcggt
gttgtcaccagttatcttctcgagagtggggtcatgccctatttgtacatgctaggcttt
gaagttattggttatggctgctcgagttgtgtggataacaccaaaccccttccgggcccg
attgtggatgccatccgacaaggcagtctcgtttgttgtggagtgatgtcgggcaatcgc
aactttgagagccgagtccaagcagacatcaaggccaactatctggcatctcccatgcta
gtcattgcatattcgatagcaggtcgagtggacattgacttcgagcgtgagcccatcggg
ttcacagccgagggtaaacccatctttttgtcagaggtgtggccgagtcgccaggaaatc
caggaaatggagaaccgctttgtgattcccgccatcttccggaacgtggttggtcgcatt
tcgtacggcaacaagcattggtcggctttggaaacggctgaatcagacctgcacttccca
tgggaccagagctcgacttttatcaagcctcccctctatatcaccgagttggcagagaac
ttacccgaaacccccaaatcttggctgaaaggcatgcgatgcctactcaaattgggtgat
aatgtgacctctgatcacatatcgccagcgggcagtatcgttcgcaatagcccagcagcc
gattacttgtccagtttgggtctggctcctcgagaatacagcagttatggggccaggcgg
ggcaattgtgaggttatgatgcgaggaaccttcggtcatatcagattgaagaacgagcta
agcaaaaaagagggtccttttaccactcacttgccctcaggtgtgccaacaacgattttt
gaggcctctcagcgttacaaagtggagaaagtgccccttttcgtgattgcgggcgagaac
tttggtcgaggtacggctcgagattgggctaccaaagggcccctactcttgggggtgaag
gccattctagccttgtcttttgactccaactatcgtgccaatctggtcaagtctggcatt
cttcccgtgcagattgatcggacgacttatgaaatactgacagggagagaaatcctggac
attgaactgcccgagagcgaagaggatgagcaattaaaggtgtcgttggttctcaaccat
gactttgacatttctgcagatctaagattggataatgaatacgagaagtccttataccaa
gatgggggcgtcatccggcagaagatgcgggatctcgtcgccgaatcttga
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