Tigriopus californicus (tidepool copepod): 131885972
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Entry
131885972 CDS
T09700
Name
(RefSeq) neurogenic differentiation factor 4-like
KO
K08040
class A basic helix-loop-helix protein 15
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131885972
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Tal/Twist/Atonal/Hen, Atonal
131885972
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Gene cluster
GFIT
Motif
Pfam:
HLH
PUB62-63_C
Motif
Other DBs
NCBI-GeneID:
131885972
NCBI-ProteinID:
XP_059090173
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Position
1:1509974..1548869
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AA seq
459 aa
AA seq
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MITKCMLRAGGNHPSSLINNPGSSGQISIMMSSTNDSTCGSEFSDSGSSAFSDDIGMSGM
ITGNSRTPGRFVTGRMVAGGNATNPMGFIESTDDEQIIGNPGRSPNHGTRSKIPAVSATT
KISSAPTVTSIAVAAAASAAASSSSSQTNISVNGGGASGRRKKPCLSARERNVRRIESNE
RERLRMHGLNEAFQGLREVIPHVHQSRKLSKIETLSLAKNYIMALTNVICEMRGEDKPYE
LPPVGGNHVGGDMQPPQQHGMMGSPGTPDSSAIATVTALSVSVSPEGVVSSTSNVPTLSG
NDNNDNSNKSTKVTTKGFGRRNQPPKPQALIQNGPLLLMPMDLGSTSEEVEGSFQMRDAH
DTPVVGEPDAFDEEFTLMDDEDDEDKSSMILESSVLASSLTPPPHHPSHPSHHHHHHHNS
HLASGPLHLTPPSHLPLDSLLTPAASPEDDSLEPWIQTV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccaagtgtatgcttcgggccggaggcaatcatcccagctccctgatcaataac
cctggctcgtcaggtcagattagcattatgatgtcctccaccaacgactcaacttgtggc
agcgagttctcagattcgggcagttccgccttctcggacgatatcggaatgagcggcatg
atcaccggcaacagtcgaacccccggacgattcgtcacgggtcgtatggtcgccggtgga
aatgccaccaaccccatgggattcatcgaaagcacagacgacgaacaaatcattggtaac
cctggacgaagtcccaatcatggtactcgaagcaaaatcccggccgtctcagccaccacc
aagatctcatcagcccctactgtcacttccatagccgttgccgcggctgcctcagccgcc
gcctcctcctcgtcaagccaaaccaatatcagcgtaaacggaggtggggccagtgggcgg
aggaaaaagccctgtctctcggcccgtgagcgcaacgtccggcgcattgaaagcaacgaa
cgcgaacgattacgaatgcacggcttgaatgaggcctttcagggactgagagaggtgatt
ccacacgtgcaccaatcaagaaagttatccaagatcgaaaccctatccttggccaagaac
tacatcatggctctaaccaacgtcatttgtgaaatgcgtggcgaggacaaaccgtacgag
ttacccccagtaggtggcaatcacgtgggaggggacatgcaacccccgcaacaacacggg
atgatggggtccccaggcacacctgacagctccgccatcgcaactgtaacagccctgtct
gtttcagtgtcacccgagggcgtggtctcatccacttccaacgtcccaacactcagcggt
aatgacaacaacgacaatagcaacaagtcaacgaaagtcactactaaaggattcggccga
cggaaccagcctcccaagccccaagctctaatccaaaacgggcccctgctcctcatgccc
atggatctcggttccacgtcagaggaggtggagggtagctttcagatgcgagacgcccat
gacacgcccgtagtgggagaaccggatgcctttgatgaagaattcacgcttatggatgat
gaagacgacgaagataagtcttccatgattctggagagctccgtgctcgcctcctcactc
actcctcccccccaccacccatcccacccatcccatcaccatcaccaccatcacaattcc
cacttagcctctggtcctcttcacttgaccccgcccagtcatctcccattggattcactt
ctgaccccagcggcctcgcccgaggatgactctttggagccttggatccaaacggtgtga
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