Tigriopus californicus (tidepool copepod): 131885991
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Entry
131885991 CDS
T09700
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03013
Nucleocytoplasmic transport
tcf04141
Protein processing in endoplasmic reticulum
tcf04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131885991
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131885991
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
131885991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131885991
04131 Membrane trafficking [BR:
tcf04131
]
131885991
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131885991
Membrane trafficking [BR:
tcf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
131885991
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
131885991
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
131885991
BRITE hierarchy
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
131885991
NCBI-ProteinID:
XP_059090181
LinkDB
All DBs
Position
1:1551845..1553282
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AA seq
325 aa
AA seq
DB search
MVSLESTVDTGHDEMIHDAAMDYYGRKLATCSSDRSVKIFEMSENGVQTLVADLKGHEGP
VWQVGWANPKYGTILASCSYDRKVILWREDSPGRWNRLYEYTGHDSSVNSVSWAPHELGL
ALACGSSDGAISILTYIDSANNWKAEKIPNAHTIGCNAVSWAPYLFQQTERRFVSGGCDN
LVKIWKYDHKESKWVEECKLEAHSDWVRDVAWAPSLGVNRSVIASCSQDRRVIIWSNDGG
VGSTSWTPRTLNTFDDVVWHVSWSVSGNMLAVSGGDNKVTLWKETLDSQWVNISDVSKGQ
GASQSSGPAQTGTGPPLPVAAVGSS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtttggaatcaacggtggacaccggtcacgacgagatgatccatgatgctgcc
atggattattacggacgcaaattggccacgtgctcctcggatcgatcggtcaagatcttc
gagatgtccgaaaatggcgttcaaaccctcgtggccgatctcaaaggccatgaagggcca
gtgtggcaagtgggttgggccaaccccaaatatggaaccattttggcatcttgcagctac
gatcgaaaagtaatcctatggcgcgaggattcaccgggtcgttggaatcgattgtatgaa
tacactggacacgattcctcggttaattcggtctcttgggcgcctcatgagctaggtcta
gccttggcgtgtggatcgtcggatggagccatctccattttgacctatatcgattcggcc
aataattggaaggcggaaaaaatccccaacgcccacaccattgggtgcaacgcggtatct
tgggcgccttatttgttccaacaaaccgagcgccgtttcgtcagtggaggatgcgacaat
ttggtgaagatttggaagtatgatcacaaggaatccaaatgggtcgaagagtgcaagctg
gaagctcattccgattgggtgcgagacgtggcgtgggctccatcgttgggcgtgaaccgc
tccgtgatcgcatcgtgctctcaagatcgccgtgtaattatttggagcaatgatggcggc
gttgggtccacctcctggacaccgcggaccctcaacacctttgatgatgtggtgtggcac
gtcagttggtccgtctccggtaacatgctggccgtttccggtggtgataacaaagtaact
ctgtggaaggaaaccttggacagccagtgggtcaacatctcagatgtgagcaaagggcaa
ggtgcgagccaatcctctggtcctgctcagacagggaccggccccccgctccctgtggct
gccgtgggctcaagctaa
DBGET
integrated database retrieval system
