Tigriopus californicus (tidepool copepod): 131886014
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Entry
131886014 CDS
T09700
Name
(RefSeq) synaptojanin-1-like isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00562
Inositol phosphate metabolism
tcf01100
Metabolic pathways
tcf04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
131886014
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
131886014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131886014
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
131886014
Membrane trafficking [BR:
tcf04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
131886014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
131886014
NCBI-ProteinID:
XP_059090201
LinkDB
All DBs
Position
9:5909432..5915298
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AA seq
1289 aa
AA seq
DB search
MAMGRPLRVYHNLPQVGVHAAYSLVMEQKNRDEILLVENYAIVALGVREFEALKKDYVKH
TDAFGSLGILRVSDGSPGIGEHVLYFLVLVTGCVSAGKIGTSEIYRVTNVVMISMRNLPQ
DEEKVTEIKKLLCCGAFYFAWSHHDTPIDLTLSTQKAVKFAKTDNRFFWNRMCHIPFIRH
GINCQDWLLKVMCGSVEIRTVYVGSRQAKAVVISRLSSERAGTRFQVRGVDDQGHVANFA
ETEQMIVVGEDISSFLQIRGSVPLFWDQPGINVGSHKIRMSRGPELSTTAFDLHLTTLKQ
NYGHQAIVNLLGSSLVGSKEGEATLSTAFQTHQKLCEQHLDVPHILFDYHAEVKGGSIKN
LSRLHEKVQQCVNKFGFFTKVGPNVSREQYGTVRTNCTDCLDRTNAVQAFLGNQILAYQL
QDLQLDDKSNIVSRFEEMFKQMWQNNGNELSKMYAGTGALGGGTSKIIDGARSAARTIQN
NLLDQSKQEAIDVLLFGSSFNSDLADRARVLLPSHYINAPRPVLESLVHRYLSYSEPVPL
RVGVGTYNINGGKHFRSIVYKDVSLSDWLLDAHKTVKESALIDLSECSTDEKKPIDIYAI
GFEEMVDLDAKNIMNASSENAKSWASELTKTLNRDEKFSLITYQQLVGVCLYVFVRPELA
PHIQDVAVDCVKTGMGGATGNKGAVAIRLRYHSTSICFVCSHFAAGQGNITDRNNDFNEA
VKRIIFPKGRTLMSHDYVFWCGDFNYRINMAREDVKALVANEDWETLLSADQLKIEHGEG
NVFQGFIEGPVNFPPTYKYDLFSDDYDTSEKCRVPAWTDRILWRRRQLSRVPPEGWSAGQ
CHWYGRANLKQSDHRPVLAILDVEALKVNVEKREAIFEDALKDVGPPDGSVLLQFENVVS
FDLQNVIDDHFMDELHEELGKVGPIRFTKYINEMIWVAFMNHSHALDAEKVHQISVCGHE
ITIRLKHPNWRELLEQELELCSSNTIPLCGTKELNMRKESARMLSQLSQLSFEELEDITM
TVSNQDPSVETPATVPPARPRPPPPRPAPPPGRPAQPPSRPSAPPARPAPPPERPKPPGR
PEAPKSASASPQPPRKPPPPMMPPKQAVEDQDTRMEEPLARPPNFVREISQTPSEKAGFS
DIFTVTSPVTADLPISSSTGSIVALTMDPSSGTTTKSSSSTTSLEYPEGYDPVIESGKAW
SNGQEQTIPGQDKPTDLPVVRQLPKLPPRQSSSESGKSTPSGSTPGSPFKLAPKKGGAPP
PAPPPRVPPTLPGRPPASAGRAPPPIPKR
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggccatgggacgccccttgcgggtgtaccacaacctgcctcaggtgggcgtccatgcc
gcctactccttggtcatggagcagaaaaaccgcgacgagattctcttggtcgagaactac
gccattgtggctttgggcgtgcgcgagttcgaggccttgaagaaggattacgtgaaacac
accgatgcttttggcagcttgggcattctccgcgttagcgatggctcacccgggataggc
gagcatgtgttgtatttcttggtcctggtcacgggctgcgtttcggcgggtaaaatcggc
acctccgagatctatcgggtgaccaatgtggtcatgatttccatgcgcaacttgccgcaa
gatgaggagaaagtgaccgagatcaagaaactgttatgttgcggtgcattctactttgcc
tggagccaccacgacacgcccatcgatctgacgctctccacacaaaaggccgtcaagttt
gccaagacagacaaccgattcttctggaatcggatgtgtcacattcccttcattcgtcat
ggcatcaattgccaggattggctcttgaaggtaatgtgcggcagtgtggagatacgaact
gtctacgtgggatcgaggcaagccaaggcggtcgtgatttcccgactcagttctgaacga
gcgggcaccagattccaagtccgaggcgtggacgatcaaggtcatgtggcgaatttcgcc
gagaccgaacaaatgatcgtggtgggagaagatatctcttcgtttctacaaattagagga
tccgttccactcttttgggatcaacctggaatcaatgtggggtcgcacaagatccgcatg
tccaggggtcctgagttatccaccacggcctttgatctgcatctcaccacgttgaagcaa
aactacggacatcaagccatcgtcaatctattgggatcgtctttggttgggagtaaagaa
ggcgaggcgacgctttccacggcttttcaaacccatcaaaagctatgtgagcagcatttg
gatgtgccgcacattttattcgactatcacgccgaagtcaaaggtgggagcatcaaaaac
ctttctcgtcttcacgaaaaagtccagcaatgtgtcaacaaattcggattctttaccaaa
gtcggacccaatgtctcgcgggagcaatatggcacagtacgcacgaattgtacggattgt
ttggatcgaaccaatgccgttcaagctttcttaggaaatcaaatactggcctatcaacta
caagacctccaattggacgacaaatccaacatcgtgtctcgattcgaagaaatgttcaaa
caaatgtggcaaaacaatggcaatgaactcagcaaaatgtatgccggaactggggctttg
ggtggtggaacctccaagatcattgatggtgcaagatcggcggccagaacgattcaaaat
aatctcttggaccaatccaaacaagaggccattgatgtccttctctttggaagctccttc
aatagcgatcttgctgatcgtgctcgagtgctattacctagtcattatatcaatgctcct
cgtccggtcttggagagtctggtccatcgatacttgagctactccgagccggttccatta
cgggtgggtgtcggtacctacaatattaatggtgggaagcatttcaggagcatcgtgtac
aaggatgtttccttgtccgattggctccttgacgcccacaagacggtgaaagaaagcgcg
cttatagacttgagcgagtgttccacggatgaaaagaagcccattgatatttatgccatc
ggctttgaagagatggtcgacttagacgcaaaaaacatcatgaacgccagctcggagaat
gccaaatcttgggctagtgagctcaccaagacgctcaatcgcgatgaaaagttcagcttg
atcacttaccaacaattggtgggcgtttgtttgtatgtgttcgttcgacctgaattggcg
cctcacattcaagatgtggccgtggattgcgttaaaacaggcatgggtggtgccacgggc
aataaaggggcggtagccatccgacttcgataccactcgacgtcaatttgctttgtttgc
tcacattttgccgcagggcaaggtaacatcacggacagaaataacgattttaacgaggcc
gttaaacgcatcatctttcccaagggtcgaactttgatgagccatgattacgtattttgg
tgcggggatttcaattatcgaatcaatatggccagggaggatgtcaaagccttggttgcc
aatgaagattgggagacccttctcagcgctgaccaactcaagattgaacatggagaaggc
aatgtgttccaaggcttcattgaaggccccgtgaactttccccctacttacaagtacgac
ctgttctcggatgattacgacacatccgagaagtgtcgagttcctgcttggacagatcgg
attctttggcggagacgacaattgtctcgtgttcctccagagggttggagtgccggacaa
tgccattggtatggacgagcaaatctgaaacaatccgatcatcgacctgtccttgcaatt
ctggatgtcgaggcattgaaggtaaatgttgagaaacgcgaggccatcttcgaagatgcg
ctcaaggacgtgggaccgccggatggttctgtgttgcttcaattcgagaacgtggtctcg
ttcgatcttcaaaacgtcattgatgatcatttcatggacgaacttcacgaggagttgggg
aaagtgggacctattcgattcacgaaatacatcaacgagatgatttgggtggcgttcatg
aatcattcacacgctctagatgccgaaaaggttcaccaaatatctgtttgtggtcacgag
atcaccattcgcctgaaacatccaaattggcgagaactccttgagcaggagttggaactc
tgctcaagcaataccattcccttgtgtggaaccaaagagcttaatatgagaaaggaatcc
gctcgaatgctctcacaactctcacaactctccttcgaggaattggaagatatcacaatg
acggtgtcaaatcaagatccaagtgtggagacaccagccactgtgcctccagcaaggcca
cgcccccctcctcctcgtcctgctcctccgccaggtcgtccggcccaaccaccttcaaga
ccctcagctcctcccgcaaggccagctccacctccggaaaggcctaaaccccccggaaga
ccggaagctcccaaatcggcttccgcatccccacagcctcccagaaaaccgcctccaccc
atgatgccacccaaacaagctgtggaggatcaagataccagaatggaagagcctctagcc
agaccacccaatttcgttcgagaaattagtcaaactccctcggaaaaagcaggtttctcc
gacatttttaccgtgacctcgccggtgaccgccgatcttcccatttcatcgtctaccgga
agcatcgtagccttaaccatggacccgtcttcgggaaccaccaccaaaagctcgtcctcc
accaccagtttagaatatcccgagggctacgaccccgtgattgagtctggcaaagcttgg
tccaacgggcaggagcaaaccattccggggcaagacaagcccacggatctgccggttgtg
agacaattgcccaaactccctccgcgtcagagttcgagtgaaagtggaaagagcacgccc
tcgggttccactcctggttcaccattcaaattggcccccaaaaaagggggtgccccgcct
ccggcaccacccccacgagttccaccaacacttccgggtcgaccgccggcctcagctggt
cgagcccctccccccattcccaagcgctaa
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