Tigriopus californicus (tidepool copepod): 131886042
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Entry
131886042 CDS
T09700
Name
(RefSeq) rhomboid-related protein 1-like
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tcf01002
]
131886042
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
131886042
Peptidases and inhibitors [BR:
tcf01002
]
Serine peptidases
Family S54: Rhomboid family
131886042
BRITE hierarchy
Motif
Pfam:
Rhomboid
EF-hand_1
EF-hand_5
EF-hand_7
EF-hand_6
DUF4084
RB_B
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
131886042
NCBI-ProteinID:
XP_059090243
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All DBs
Position
9:complement(14285872..14287464)
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AA seq
444 aa
AA seq
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MLFQAVNATVHKMFGFGPQIAKLLRHEETNGISTPTTTIDIPLEIEETAQDISLLEVDTT
SDDGQIFDLLDRADGTRDGRIDTRSLLKWVTAMDLKKAIDMEANLNITPTRLERLVSRAD
ANKDGFVDKEEFSQMLRDHAQELDKAQRSLFRQYLKVIAYGEEITLCPPPIFILSVAILE
VIVFISHMVQFHKHHPELPVAWNEIAPLCSKLILNPNQRAQVWRFLTYSLVHSGFQHFAL
NVVMQILVGLPLEMTHGPYRVGTVYLVGVLAGSLGSSIFEPHAFLAGASGGVYALIGAHL
ATLILNWREDIMIINKRVRRGKATSAKHGHMIRTLRLILVLAYAVVDPVIAIIKHNGKTS
YVAHLSGALIGVLIGIVVLKNRKVEHWEQKLKTVCLALVMVIMVPVLSWNIFADFIVRLV
HGNNATYFGVEPGHEFLRSCHNYI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcaagccgtgaacgcaaccgtgcacaaaatgtttggcttcgggccacagatt
gcgaaacttcttcgccatgaagaaaccaacggaatctcaaccccaaccaccaccattgac
atccccctagagattgaggagacagctcaagacatttccttactagaagttgacacgacc
tcggacgatggccagatttttgatctactcgaccgggccgatggaacccgagatggaagg
attgacactcgaagtcttctgaaatgggtgacggccatggacctgaagaaggccatcgat
atggaagccaatttgaatatcacacccactcgattggaacgtctagtgtcgagagcagat
gcgaacaaagatggatttgtcgacaaagaagagttctctcagatgctccgggatcatgcc
caagagctcgataaagcccagcggagtctctttaggcaatatctcaaagtgatagcctac
ggcgaggagatcacattatgtccccctcccattttcatcctgtcagtggcgatcctcgag
gtgatcgtttttatttcacacatggtgcaattccacaaacaccatcctgagctgccagtg
gcatggaatgagatcgcacccctgtgttccaaactgattttgaatccaaaccaacgcgct
caggtttggcgtttcttgacttacagtctggtccattccggattccagcatttcgctctc
aacgtcgtcatgcagattcttgtcggtcttcccctggagatgacccacggtccctaccgt
gtgggtactgtgtatttagtgggagtgttggctggatcacttgggtcgtcaatctttgaa
ccgcatgcgtttttagcgggagcatccggcggagtatacgctctcattggtgcccattta
gcgacactcattctcaattggcgggaagatatcatgatcatcaacaaacgcgttcgccgg
ggaaaggcgaccagtgccaagcacggacacatgatccgaacgctcagattgattttagta
ctcgcttacgccgtggtggaccccgtcatagcaatcatcaaacacaacggtaaaacctcg
tacgtggcccatttgtctggagctctcatcggagttttgatcggaatcgtcgtgttgaag
aatcgaaaagtggagcattgggaacaaaaactaaaaacagtgtgtttggcattggtaatg
gtgatcatggtgccggttttgtcatggaacatttttgctgacttcattgttaggttggtt
cacggcaataatgccacatactttggcgtggaaccaggccacgagtttctacgctcttgc
cataattatatttaa
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