Tigriopus californicus (tidepool copepod): 131886076
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Entry
131886076 CDS
T09700
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcf03009
]
131886076
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
131886076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
CAF1C_H4-bd
Beta-prop_SCAP
Beta-prop_WDR19_1st
MIOS_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
131886076
NCBI-ProteinID:
XP_059090289
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Position
9:complement(11632744..11634548)
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AA seq
489 aa
AA seq
DB search
MDTNQKEFKVPAIPDENMDEDPASSDEDDEDQDADDFIEEEEEDDDDEEEDEENDEEGET
EDGQPLTNRAYVPGSEPLADNEELVMDEGAYVVYHQASLGPPCLSFDLVQDEQPASALEE
YPYSLYGVAGSQAAKANANCIITFKMFNLHPLTSKKAKSPSDPDQSEDESEDEDDSAQDP
ENQPKLKVASIKHNGGINRIRYKMLGSTAVAAVWSELGSVGIYGLNHCLQQLEIPTSGND
WYRETTPPIFSFKGHLTEGFALNWSPTVPGLLATGDCRQNIHVWQPQEAGTWAIDQRPYA
SHTASVEDIQWSPNEPNVMASCSVDQSIKIWDCRAKPDQACMLTVKHSHASDVNVIDWNR
HEPFIASGGDDGCMKVWDLRQFEKGEPVATFKHHTGPVTSVEWHPSDPTVLASSGADDQI
ALWDLALEKDDEAEQPSGTGDELKDLPPQLLFIHQGLQDIKELHWHRKYPGLLVSTSHSG
FDVFRTISV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggacacaaaccagaaggaattcaaggtcccggccatccccgatgaaaacatggacgaa
gatccggccagttccgacgaagatgacgaagaccaagacgcggatgatttcatagaagaa
gaggaagaagacgacgacgacgaggaggaggatgaggagaatgatgaagaaggcgagacc
gaggacggccaacccctgaccaatcgggcttatgtgcccggttccgaaccgctggccgac
aatgaggaactggtcatggacgaaggggcctacgtggtttatcatcaggcctcattgggc
ccaccttgtttgtccttcgacctcgttcaagacgaacaacccgcctcagccctggaggag
tacccctactccctgtacggcgtagctgggtctcaagccgccaaggccaatgccaattgc
atcattaccttcaaaatgttcaacctccacccgttgacctcgaaaaaagccaaaagccca
tctgaccccgaccaatcggaggacgagtccgaagacgaagacgatagcgctcaagaccca
gaaaaccagcccaagttgaaagtggcctcgatcaagcacaacgggggcatcaatcggatc
cggtacaagatgttgggttcaacggccgtggctgcggtttggtccgaattgggctcggtc
ggcatttacggcttgaaccattgtctccagcaactcgagatcccgaccagtggcaacgat
tggtaccgcgagaccaccccgcccatcttcagtttcaagggccatttgaccgaggggttc
gccctcaattggtcgcccaccgtccccgggctcttggccaccggggattgtcgccagaac
atccacgtatggcagccccaagaagccggaacgtgggccattgaccagagaccctacgcc
tcgcacacggcctcggtcgaggacatccaatggtcgcccaacgagcccaatgtcatggcc
tcgtgctcggtcgaccaatcgatcaaaatctgggactgccgagccaagcccgatcaggcc
tgcatgttaaccgtgaagcacagccatgccagtgatgtgaacgtgatcgattggaaccgc
catgagcccttcatcgcatcagggggtgatgatgggtgcatgaaagtctgggatctccga
cagtttgaaaaaggcgagcccgtggccacgttcaagcatcacaccggacctgtgaccagt
gtggaatggcacccgagcgatcccacggtgctggcctcgagtggggccgatgatcagatt
gctctgtgggacttggctctggagaaagatgatgaagccgagcaacccagtggcactggc
gacgagctcaaagacctacccccgcagttgttgtttattcatcaaggtttgcaagacatc
aaagagctccattggcataggaaatatccgggactcctcgtcagcacgtctcactccgga
tttgatgtattccgaaccatcagtgtgtga
DBGET
integrated database retrieval system
