Tigriopus californicus (tidepool copepod): 131886122
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Entry
131886122 CDS
T09700
Name
(RefSeq) RNA-binding protein 5-like
KO
K13094
RNA-binding protein 5/10
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131886122
Spliceosome [BR:
tcf03041
]
Complex A
Other components
Complex A specific factors
131886122
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Gene cluster
GFIT
Motif
Pfam:
G-patch
OCRE
RRM_1
G-patch_2
Zn_ribbon_RanBP
DUF7066
zf-C2H2_jaz
Zn_ribbon_3
Zn_ribbon_TEX13
TackOD1
Motif
Other DBs
NCBI-GeneID:
131886122
NCBI-ProteinID:
XP_059090346
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Position
9:complement(12114148..12129760)
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AA seq
858 aa
AA seq
DB search
MDLLMAAESYAQAAAVAQAQAYLAAWHGPHVRPSTTGMLSSTSILGPQFVTAPGGVIPPP
PTHMSRETRSVKRSSSRDRDRSERDRSRDHRRRRERSRDRSRDRDRDRDRSRSRKDRSRE
RRRERSRERGGRSPRRDRRDRTPSSEDEGRYAPPNTTVMVRGLAQHIGENEIREDIVQCN
LVAQDIRVIRKKETRTSRGFAFVDFDQLQDAKKWMDERKGVLIFGDNSRAVMQYSVPKSE
KGRDVPRSVADWTCPKCGIKNFRRREMCFKCGVAKPDDEGEDAEESSSTPSCTVLLRDLD
PLTSEDKVLTVLNKLNDRPIKAIRIGRDNLTNMSFGVCYIDMNTLVDAISLHNTLLGQPP
IIDDKLISVSYLQTKTLTPTQAANTALAAAQWSHQGKQPSEAEIESMAEYSANMYAKDPT
EKLYYLEYYRNYFRNVGDQGAVSSSSPSVSSSVAVTSAANPLPNLGVIKVSGVDYKIFPP
PDTSTYAYDEASGYYYDAQTTFYYDANTRYYYNSKAGIYVYWSPEHQTYLPVQQKAENPQ
KEDTELPVEDGNINTPKEKTEKVKSAKRIAKDMEKWAKTLNQKKDAAKNFSPVEVAPAVM
NTKSSAAVSASGAQDVAFNMLRSNTCVGVASSSLSSSSSSTTATAASKISMPTGLGSLPG
YGSEPEDEPGANQSASRPAPNFTDWDGLACLLCERQFASKEKLQKHNLKSDLHKENLDRF
HRDNESATSTSKASSSGSAFQYRDRAKERRQKYGEDDHPKPNRLKEHYLRAMEEVESQAV
PEKKIDDSNIGNRMLQRMGWKQGLGLGKANQGRTTIVEADRRTHQAGLGSAKVLPKNPNQ
TYKDAVKRTLFQRFQDMD
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgatggcggccgagtcttacgctcaagccgcagccgtggctcaagcccag
gcatatctagctgcttggcacggtcctcacgtccgacccagcaccacgggcatgttgagt
agtacctccattttagggccccaatttgttactgcacccgggggcgttatccccccgccg
cccactcacatgtccagggagacccgttcggtcaaacgttcatccagtcgagatcgagat
cgctcggaacgggatcgttctcgtgatcaccgacgtcgacgggagcgttctcgagatcgt
tctcgggaccgtgaccgagatcgggaccgaagtcgaagtcgaaaggatcgttcacgcgaa
cgccgaagagagcgatctcgcgaacgaggaggccgatcacctcgacgagatcgtcgagat
cgtacaccttctagtgaggatgaaggccggtatgcccctcccaacaccactgtaatggtc
cgagggttagctcaacatattggagagaacgaaattcgtgaggatattgtccaatgtaac
ttggtggcacaggacatccgagtgatccggaaaaaagaaacacgtacatcccgtgggttt
gcctttgtggactttgaccaactccaagatgccaagaaatggatggatgagagaaagggg
gtgctcatcttcggcgacaactccagggccgtcatgcagtacagtgtgcctaaatctgag
aagggtcgagatgtcccgcggagcgtcgccgactggacttgtcctaagtgcggcatcaag
aacttccgacggcgagagatgtgctttaaatgtggagtggccaagcccgacgacgaaggc
gaggatgccgaagagagctcttccacgccctcgtgcactgtcttgttaagggatctagat
ccgttgactagtgaagataaagtattgaccgtgctcaacaagctgaatgaccgaccaatc
aaggccattcgaattggccgggataacttgacgaacatgtcttttggcgtttgttacatc
gacatgaacacgctcgtggatgccatctctttacacaataccttgcttggacagccaccc
atcatcgatgacaagctcattagcgtcagttacctccagacaaagaccttgaccccaacg
caagcggcaaacacggccttggccgccgctcaatggagtcaccagggaaaacagccttcc
gaagcggaaattgaaagcatggcagagtattcagccaatatgtacgccaaagatcctacg
gaaaagttgtattatttagagtattaccggaactactttcggaatgttggggatcaaggt
gcagtttcctcgtcttctccaagtgtgagctcaagtgttgctgtcacttcggccgccaac
cctctgcccaatttgggagtcatcaaagtcagtggtgtggactacaaaatatttcctcct
ccagacacgagtacttacgcgtatgatgaagcatcagggtattattacgatgcccagacc
accttttactacgatgccaacacgcgatactattataattccaaagccgggatctacgta
tactggtcgcccgagcatcaaacctatttgccggttcaacaaaaggccgaaaaccctcaa
aaagaagatacggaacttcccgttgaggatggcaatatcaatacgcccaaagaaaagact
gagaaagtcaaatccgccaagcgaatcgccaaggatatggagaaatgggccaagaccctg
aaccagaaaaaagacgctgccaagaacttctcgcccgtggaagtggctccagctgtgatg
aataccaaaagctctgctgctgtgagtgccagtggagcccaagatgtggcttttaatatg
ttgcgaagcaacacctgtgtaggggtggcttcatcgtcgctatcctcctcctcgtcgtcg
acaactgccactgcggcttcgaaaatctccatgccaacaggtttagggagtttacccgga
tatggatctgagcccgaagatgaacctggagcgaatcaaagtgcatcaagacccgcgccc
aacttcacggattgggatggattggcatgtttactttgtgagaggcaatttgcttccaaa
gagaaacttcagaaacataacctgaaatctgaccttcataaggagaacttggaccgattc
caccgcgacaatgaaagtgcaacaagtacttccaaagctagttcaagtggttctgccttc
caataccgtgatcgcgccaaagaaagacgtcaaaagtacggcgaggatgaccacccgaaa
cccaacaggctcaaagaacattatctcagagctatggaggaggtcgaatcccaagcagtt
ccggaaaagaagatcgatgactcgaatattgggaaccgcatgcttcagaggatgggttgg
aaacaaggattaggcttgggcaaagccaatcaaggaagaaccactattgtcgaggctgac
cgaaggactcatcaagcaggattgggaagcgccaaagtgttacccaaaaacccaaatcaa
acttacaaggacgctgtgaagcgaacattatttcaaagattccaagatatggactaa
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