Tigriopus californicus (tidepool copepod): 131886228
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Entry
131886228 CDS
T09700
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-like
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03020
RNA polymerase
tcf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131886228
09124 Replication and repair
03420 Nucleotide excision repair
131886228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131886228
03400 DNA repair and recombination proteins [BR:
tcf03400
]
131886228
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
131886228
DNA repair and recombination proteins [BR:
tcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
131886228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
131886228
NCBI-ProteinID:
XP_059090479
LinkDB
All DBs
Position
9:complement(15556898..15557809)
Genome browser
AA seq
118 aa
AA seq
DB search
MNAPPTFESFLLFEGEKKITKEQDTKVPNASIFSINKEDHTLGNMVRCQLLKDPNVLFAG
YKNPHPLEHKVILRIQTTSDYTPQEALMNAITDLISELSLFEERFKESVREKQDTGYD
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccctccgaccttcgagtcgtttttgctctttgagggcgagaagaagatcacc
aaggagcaagataccaaagtgcccaatgcgtccattttctccatcaataaggaggaccac
actttgggcaacatggtacgatgtcaattgctgaaagatcctaatgtgttgttcgccggc
tacaagaatccccatcctttggaacataaagttattctgcggattcagaccacttctgac
tacacgccccaagaggcactcatgaacgccatcaccgatctcatctccgaattgtccttg
ttcgaagagcgattcaaggaatccgtgcgggaaaaacaagacaccggttacgattaa
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