Tigriopus californicus (tidepool copepod): 131886295
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Entry
131886295 CDS
T09700
Name
(RefSeq) F-box/WD repeat-containing protein 11-like
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04120
Ubiquitin mediated proteolysis
tcf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131886295
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
131886295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131886295
03036 Chromosome and associated proteins [BR:
tcf03036
]
131886295
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131886295
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
131886295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
F-box-like
Beta-prop_SPT8
Beta-prop_IFT140_1st
F-box
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
PQQ_3
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
131886295
NCBI-ProteinID:
XP_059090566
LinkDB
All DBs
Position
9:complement(6555474..6556826)
Genome browser
AA seq
410 aa
AA seq
DB search
MSLPPNIVDFLFDNGNFDHILKKIFRSLDGNSLASVEATSRRWKSFIRQHIWCDATAKLE
LDEAWSKHIPTFSVKFHRSKLVSLACSAQYIVGGEEMSGNLVVYNRQEIVRTRINMSHII
GSGSVPKLNDGIRPLFLTSAHLKTVTTVCLSGDLLFTGSLDGSIRAWDITKGLLLKTIIK
DNKEIHDLKVKSKQLFFTFGFTIMVYNLSEGPDGDLTAVVKTMLVGHKGPVLSLAINQQQ
TMASASGDKTVILWNIKQCKVSRTLIGHKAIVRCVAINQDFCASGSFDRTCRIWSLATGS
CVREIQQELSVRSITMNQYRLVTGDTGGYVFIWSLPNCVDDSKGPDKLCWRAHNAIDSDR
PMKEPHRAVYGVHMENGVLITLAGQNGRIGVQDFWDNIGPDVFKLESYVI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccctccgaatattgtggacttcctctttgataatggtaactttgatcacata
ttaaagaaaatctttcgcagtcttgatggcaacagtttggccagtgtagaagccaccagt
cgccgttggaaatcattcattcgtcaacatatttggtgtgacgccacggccaaattggaa
cttgacgaggcttggtccaaacacatccctacattttccgtcaagtttcatcgctccaag
ttggtctctttggcttgttccgcccaatacatcgtgggaggagaggaaatgtctggtaac
ttggtggtctacaatcggcaagagattgtacggactcgtattaacatgtcccacattatc
ggctcaggatcagttccaaagcttaatgatggcattcgacctttgttcttgaccagtgct
catctcaagacagttacaacggtatgcctgagtggtgatctactcttcaccgggtcttta
gacgggtctattcgagcatgggatatcacaaaaggattgctcctgaaaaccatcattaag
gacaacaaagagatccatgacctcaaggtcaagtccaagcaactgtttttcactttcggg
tttaccatcatggtctacaacttatccgaaggacccgacggggacctaacagccgtagtc
aagaccatgctcgttgggcataaaggtcctgttttatccttggccatcaaccagcagcaa
acgatggccagtgcttcgggggacaagacggtcattctctggaacatcaaacaatgcaaa
gtgagcaggaccctgattgggcacaaggctatagtacgctgcgtcgccattaaccaggat
ttttgtgcgtcgggctctttcgaccgcacgtgtcggatttggtcccttgcgacgggttct
tgcgtacgagagattcaacaagagctatccgtccgtagcatcactatgaaccaataccgt
ttggtgactggagacactggcgggtatgtgtttatctggtcgttacccaattgcgtggat
gactccaaaggacccgataagctttgttggagagctcataatgctattgatagcgacaga
cccatgaaagagccacacagagccgtttacggagtccacatggaaaatggagttctcatt
acattggccggtcaaaatggacggattggtgtccaagatttctgggataacatcggccca
gatgtttttaaactggagtcctacgtcatttga
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