Tigriopus californicus (tidepool copepod): 131886310
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Entry
131886310 CDS
T09700
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131886310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131886310
03012 Translation factors [BR:
tcf03012
]
131886310
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
131886310
Translation factors [BR:
tcf03012
]
Eukaryotic type
Release factors
131886310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
131886310
NCBI-ProteinID:
XP_059090583
LinkDB
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Position
9:complement(8428414..8430197)
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AA seq
438 aa
AA seq
DB search
MSGNEETTSDKNVEIWKVKKLIKSLQKARGNGTSMISLIIPPGDQVSRVSKMLADEYGTA
SNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKP
INTSLYLCDNKFHTEALTALLADDNRFGFIVMDGNGALFGTLQGNTRDVLHKFTVDLPKK
HGRGGQSALRFARLRMEKRHNYVRKVAETAVTLFISNDKPNISGLILAGSADFKTELSQS
DMFDPRLQAKIIKLVDVSYGGENGFNQAIELAAESLANVKFIQEKKLIGKYFDQISQETG
KYCFGVEDTLRCLEMGAVETLICWENLDIQRFTLKNHSTGEEKILHLSSEQEKDMTHFTD
KDTGVELELEENIPFLEWLANNYKNFGATLEIITDRSQEGSQFVRGFGGIGGMLRYKVDL
QALQLDEFDEEEFDLDDY
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaacgaagaaaccacgtcggacaagaacgtggagatctggaaagtgaagaag
ctgatcaaatcgttgcagaaggcccgcggcaacgggacctcgatgatatcgctcatcatt
ccgcccggcgatcaagtgtcgcgcgtgtccaagatgttggccgatgagtacggcacggct
tccaacatcaaatcccgggttaatcgcttatctgtgctgggcgccatcacctccgtccag
caccgcctcaagctctacaccaaggtcccgcccaacggcctagttgtctattgtggtacc
attgtcaccgacgagggcaaggagaagaaggtcaacatcgacttcgagcccttcaagccc
atcaacacgtcgctctacctctgcgacaacaagttccacaccgaggccttgacggccctg
ctggccgacgacaaccgattcggtttcatcgtcatggacggcaatggcgcgctcttcgga
acgctccagggcaatacccgtgatgtgttgcacaagttcaccgtggatttgcctaaaaag
cacgggcgcggtggtcagtccgccttgcgtttcgcgcgtctccgcatggagaagcgacac
aactacgtgcggaaagtagctgaaaccgccgtcacgctcttcatctccaacgacaagccc
aacatttcgggcctgattctggccggtagtgcggactttaagaccgagctgagtcagtcg
gacatgtttgacccgcgtttgcaggccaagatcatcaaactggtggatgtctcctatgga
ggcgagaacggcttcaaccaggccattgagttggccgccgaatcgctggccaacgtgaaa
ttcattcaagagaagaagctgattgggaaatattttgatcagatcagccaggagaccggc
aagtactgcttcggcgtggaagatacgctccgttgtttggagatgggcgcggtcgagacg
ctcatctgttgggaaaacctggacatccaacgtttcacgctgaaaaaccactccaccggc
gaggagaagatcttacatctgtcttcggaacaggaaaaggacatgacccatttcacggat
aaagacacgggcgtcgagctcgagctagaagaaaacatcccgttcctggagtggttggcc
aacaactacaagaacttcggggccacgctggaaatcatcacggaccggtcgcaagaggga
tcgcagttcgtccgaggtttcggaggcattggaggcatgctccgctacaaggtggatcta
caggccttgcaactcgatgaatttgatgaggaagaatttgatttggacgactattag
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