Tigriopus californicus (tidepool copepod): 131886455
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Entry
131886455 CDS
T09700
Name
(RefSeq) probable G-protein coupled receptor No18
KO
K04162
5-hydroxytryptamine receptor 6
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04080
Neuroactive ligand-receptor interaction
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131886455
04082 Neuroactive ligand signaling
131886455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tcf04030
]
131886455
G protein-coupled receptors [BR:
tcf04030
]
Rhodopsin family
Biogenic amine
Serotonin
131886455
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Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
131886455
NCBI-ProteinID:
XP_059090786
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All DBs
Position
9:complement(<12943494..12950349)
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AA seq
490 aa
AA seq
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MDGSELHSVFDGTVPSVLMVLIEITLVVCFLLGSALNTILLLVYIRRRGFRSQISNKFLL
NLVFSNLLWNLVLIPILLFDNAISTLEDPEFRSKVAYTVFQFFLIFGTCASLLSQLLIGT
DQYLAVVDPLHYNTRVNTKRCYFMCGAVWGLSFMVATLNVINYEELGVVVSNIPIVFNTW
PSPSQAPSVSTSVFTSSFAVMLFLVPFGVLTFMYSKIFGAAHKNTMRTRHNSINSVAYAG
LQRTSTTGLSPYYGFPGQSSNYLGVTRSHSVKSAGGLRSSFKHSMCHTFSNAGNLFQYRE
DRRAAKATLLVLVMIFVCWTPFFGLISYYADITTVPNHLSPCIKGFATLLVASSSVLSPI
LYAYRSRRVQRDVKRVLGLTAYFKERKRLRTERKQLQKMKSFSCPQLHVSHEADFPMQSH
RMRKNNLLSKPPQTSDQMQSFMKSAHELVPMISHEGRCSFSSGSSSGNTTSTHITFYVGN
ANEDQSDVIL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggatggatcagaacttcattccgtgtttgatggaacggtcccatcggtgctgatggtc
ttgatcgagattactttggtggtgtgctttctccttgggtcagctttaaatacaatcttg
ttattggtttatattcgaagaagaggtttcaggtcgcagatcagtaataagtttctcttg
aacttggtcttctcgaatctattgtggaacttagtcctcatccctatcttgttgttcgac
aacgctataagcaccttggaggacccagaatttcgttccaaagtggcctacaccgtgttc
caatttttcctaatcttcggaacatgtgcctctcttctctctcaacttctcattggaacg
gaccaatacttggctgtggtggatccactccattataacaccagagtaaacactaaacgg
tgttatttcatgtgtggtgcagtgtggggattgagtttcatggtggccactctaaatgtc
atcaattatgaagagcttggcgttgttgtttcaaacattccgattgttttcaacacttgg
ccaagtcccagccaagcacccagcgtttccaccagtgtgtttacatcaagttttgcggtc
atgctttttctggttccgttcggagtgctcacgtttatgtattcaaaaatattcggggct
gctcacaaaaacaccatgaggacaaggcacaactcgatcaattccgtagcttatgcggga
ctccagcgtacttcaaccactggccttagcccctattatgggttcccgggccaatcgtcc
aactatctaggagtgactcgatcccactccgtgaaaagtgccggtggccttaggtccagc
tttaagcactctatgtgccacacctttagtaatgctggtaatctgttccaatatcgagaa
gatcggcgagctgccaaggcaacgcttttggtcttggtcatgatctttgtgtgctggacc
ccattctttgggttaatcagctattacgcggacatcactactgttcctaatcacttaagc
ccttgtatcaagggttttgcgacccttttggtggcgtcttcgtctgttttgtcacccatt
ttgtacgcatatcgatcccgccgggttcaaagagatgtcaagagagttttgggactcaca
gcttacttcaaagagcgaaaaaggctgcgaacagagaggaaacagctccagaagatgaag
tccttcagctgtcctcaactgcatgtctcgcatgaggccgacttcccaatgcagtctcat
cgaatgcgaaaaaataacttattgtctaaacctccgcaaacctctgatcagatgcagtcc
ttcatgaaatctgcccatgagcttgttcccatgatctcgcatgaaggccgttgttccttt
tcaagtggctcgagtagtggcaacaccacatctacgcacatcacattttatgttggcaat
gctaacgaggaccaatccgatgttatcttgtag
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