Tigriopus californicus (tidepool copepod): 131886550
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Entry
131886550 CDS
T09700
Name
(RefSeq) post-GPI attachment to proteins factor 3-like
KO
K23553
post-GPI attachment to proteins factor 3
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
tcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
131886550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131886550
Membrane trafficking [BR:
tcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
131886550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Per1
DUF4010
Motif
Other DBs
NCBI-GeneID:
131886550
NCBI-ProteinID:
XP_059090902
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All DBs
Position
9:10577414..10579461
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AA seq
328 aa
AA seq
DB search
MDPKTKCVLVLTFLAVYSSYDLVSASRGDGSGFQKRCLSSCFALNCSTPDRIEVFHSNQP
LFEHWLQWSCQDECRYTCMWETVEAFHRLGEKTPQFHGKWPFKRIFGVQEPASAFFSVLN
FLPHAILLRRFRRKINSSTRMYRVWCLYGIVSMNTWLWSTVFHTRDFDWTEKMDYFCAFS
IVTYSLMAFILRLCGPNWNWTSNAACVACLAMFVNHIYRMAFVKFDYGYNMTLNVAVGAA
NSLCWIAWIIWHWNTKPHVKNALISVLLLNGTILLELLDFPPLLWSFDSHSLWHLSTAPI
HWFWYKFITADCLDLQADLQAENKKKLV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaagaccaagtgtgttttagttctaacttttctcgccgtctattcttcatat
gatttggtgtcagcctccaggggtgatggatcaggattccagaagcgttgtcttagctct
tgctttgccttgaactgctccacacctgatcgaatcgaagtgtttcattcaaatcaacct
ttattcgaacattggctccaatggtcctgccaggatgagtgtcgatatacgtgcatgtgg
gagacagttgaagccttccatcgactaggcgaaaaaacgccccaattccatgggaaatgg
ccttttaaacgaatattcggtgtgcaagagccagcctcggccttcttttcggttctgaat
ttcctgccccatgccatcttattgcgaaggttccgcagaaaaatcaattcctccacaagg
atgtatcgagtatggtgcttgtatgggatcgtttcaatgaacacgtggctttggtcgact
gtgttccatactcgagactttgattggacggagaaaatggattacttttgcgcattttcg
atcgtcacttactctttgatggccttcattcttcgattgtgtggaccaaattggaactgg
acatccaatgctgcttgtgtcgcttgtctagctatgttcgttaatcacatctaccgaatg
gctttcgttaaatttgattacggttacaacatgaccttgaacgtggctgttggggctgca
aactccttgtgttggattgcatggatcatttggcattggaacacaaaaccacatgtgaaa
aatgccctcatctctgtcttactacttaacggtacgatcttattggagttattagatttc
cctccactgctttggtcttttgactcccattccctatggcacctctcaaccgccccaatt
cattggttttggtacaaattcataactgccgattgtcttgatcttcaagccgatcttcag
gccgaaaataaaaagaaactcgtttga
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