Tigriopus californicus (tidepool copepod): 131886599
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Entry
131886599 CDS
T09700
Name
(RefSeq) vacuolar protein sorting-associated protein 37B-like
KO
K12185
ESCRT-I complex subunit VPS37
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131886599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131886599
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131886599
Membrane trafficking [BR:
tcf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
131886599
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131886599
Exosomal proteins of colorectal cancer cells
131886599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
Acyltransf_C
COMMD9_HN
PIN_8
Motif
Other DBs
NCBI-GeneID:
131886599
NCBI-ProteinID:
XP_059090964
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All DBs
Position
9:6741828..6748774
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AA seq
242 aa
AA seq
DB search
MMAMPTPGGGGLGPATYSFQSSQPNYEAAVHKIQYLSKDELQDLLNNDSAFERFIQGLEQ
IQSLQGEKEMLMASNKSLAEYNLSQEPVLRRIRLELEARKNEAATLIQEVRSLLQSTDQR
RGQTDPETLLALLRASAANVDEESDQIATDFLDDKFESVDRFLEAFIEKRKVSHLRKVKG
DKLEEMIEERRRKRPTGVAGLTPARNAPPPPPAIYRAPNGPPTALVGNLPYPVNPVGMPS
PY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgatggccatgcctacgcccgggggaggggggctgggccccgccacctactcgttccag
tccagtcaacccaattatgaggcggctgtgcataaaatccaatatttatctaaagacgaa
ctccaagacctcctcaataacgacagcgctttcgaacgattcattcaagggctggagcaa
attcaaagtttgcaaggcgaaaaagaaatgctcatggccagtaacaagtcgttggccgag
tacaacctcagtcaagagcccgtcttaaggcggatccgactggaattggaagcgcgcaaa
aacgaggccgccacgctcatccaagaggtgcgatcgcttttgcaaagtaccgatcaacgg
cgtggtcagacggatcccgaaacacttttagcgttattgcgggcctcggcggccaatgtg
gacgaggaaagcgatcaaattgctactgactttcttgatgacaaattcgagagtgtggat
cgattcctggaggcgttcattgaaaagcgcaaggtgtcacatctccgcaaggtcaaaggt
gacaagctagaggaaatgatcgaagaacggcgacggaaacgcccgaccggggtagccggc
ctgaccccggcgcgaaacgctcccccgccacccccggccatctatcgtgctccgaacggg
ccacccactgctttagtcggtaacctgccgtatccagtgaacccggtcggcatgccctca
ccgtactag
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