Tigriopus californicus (tidepool copepod): 131886665
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Entry
131886665 CDS
T09700
Name
(RefSeq) serine-rich adhesin for platelets-like
Organism
tcf
Tigriopus californicus (tidepool copepod)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWC
DUF1496
Motif
Other DBs
NCBI-GeneID:
131886665
NCBI-ProteinID:
XP_059091047
LinkDB
All DBs
Position
9:5173656..5185604
Genome browser
AA seq
3391 aa
AA seq
DB search
MRPSLANSFAPLESWENGLDFPQDGCYYQYQYYNEGDQIKTNEPCLNCTCKNQMLMCYLN
VCPFIKPVGKNCVVEKHEDQCCPTIMCPQVPVELWTSTTLPPPMLSDESAISSTSTDGFS
VISASANISALPMTSIPGQGCNINDQFYMDGMQIPRDPNNPCELCYCIRNHTACVMQECR
LKVPGCEPIFQEGVCCPVKYMCKDGIYFPGQGGLIGLDGETETTALPAKNGCYQNGKFIE
EGTNIETQDPCEHCYCMGGDIICAIDPCMGGPLEGETDNCIALPPPEGECCTKEYVCTPN
NITDILDSVATTTVTNDIDQNTGDEIILPESTEGEEKEPTDEIQDDDDEDLPLAGFEDNG
AGSHQGQGSSTLVQDGNEANVTESSEEPQSSAQVKPLDSSTMTPPEEAEGDEDSPLTTTE
AGKDKNTCSLNGTTYDDGADVPSQNPCNGLCQCYKGAIICASVDCLPPPKNHLDCKPIYT
EGQCCPTYDCLEILEQVDPDEILDDDYYSEDEEAVSTSSSPIGSTTSQEGTTSNEEIQTT
TEGSDEIVSTTAPTTSVVTDGDQEIFENSSDKNATTSVPLVTTQSSTMLAEGQEQTESDS
EQSSTDNVIPDSTTTSSDSVELGDQQNDSVTQGTTVLVGDNDITDNLDNVETIVTTSSSQ
ITTNEEEATTVQSQTSIDGEIQDDDASDGIDTELTNPEETSSNESVGSTTLDSLSTTGQE
LETTTVTGTSTTADDLEQASIEGVQSTTAASASVDGDISEDDADHGVESKPVKPEESIGS
ESTTQGPEMTSDGSEASTLADVQFTTQNSQEIPSGEIQAVTEGSTTVDEEIFDDDTDEID
SEVVKPDGIGSEDSLGPNELEESTSTESAASTTLSSQSSTDQESDVTTIEDTISTTESNA
SSVEGTLDDNEDDETPKPVKPQGTDSNEEPDSATADSPLNTDQESTSVGDALSTTASPQQ
SSTGDSPTTTAASAFDAGEILDDDADYDNESEALKPIEASPSESFGSTTTDSLITTDQGS
VSTTTADIETTTEDLEQTTIGDIPSTTGASGSVDEETMDHDANDATDEESVKPSESSSSE
GLGSTTVDSIFANDQESEITTIIGDTDSTTSSLDQIAMEAIQSTTGASASVDEDILDDDT
DEAIVKPAPGSSSTEDSIIFTEQPSETTTMGNIVSTTDGLDQTTMEAIQSTTTASAGIDG
VIVDDDTNEETESIKPTEPSSSEELGSTTTGAVSSSSDESEIDTVEDNVSTTEGLEQTST
GASTIINAEPMVDEMVNNSISESLNTTGSSISSEGTNMDDSPQTTNQEVESTTVSDTYST
TENLQQVSTGVPQSTTAASASIDGEILDDDTDNETDFESETPTESSSTEKGTVPDSVLNV
DEENDTITTESSQLSSTEEIESSTGTASLSTIEETDQAMKTESPEITTISQSTTSSPTSS
ILGEISGDQEEELSTSTTSADETTAQGTTSSPMEPAIQVSTSSELEDLPSDFDILDDDSD
NNDTSIISTTSDSIFSSVPSNLSTGEFETTMGSIDSTTNVPDSTTKDMAASFNDSNDFVS
TTTSSDLSTPLLESDDNATTGAPDMTTGAPDMTTGAPDMTTGAPDMTTASVELNTNKTVD
SSTSDSTIVPSDFSNDFDLTASSTTVSMISSMGTDSTVSGGIESTTVAIDSMAFTNDSNT
EVQESTTLSAMEITTAFQDMSGSNATIIDLTSSTPTLPISDQDETNADEIPDNEKPDQDA
IVFPDSANLTSITSTASTTLGQGDTTPGSIDITTAVQQGLQQTSTESSVTNASIDTSLSC
LLFNNCKNATNSEPEALASTVNKTESINGTDISTEGEGSGLLCLLFNNCNGTLKPAEGSD
KLDSNVVDNSTVVTSDYSDILDDDSEYNPDEILDDEDGESIDYNQDECVVKNETYGNFAD
VPSENPCELCYCNYGHVICSTQICEPPQGFEDCTPLETKANECCPRQYDCAAPSLETSTV
TVTVGPSGEVESTTAATGIPGEGNCLQNGISFSNGSTVPLSNKCHAYCLCVDSEIKCDRI
PCHPAPDVPGLKCEEFLIEGECCPSHNCVSAESPVIEAGSSITTSELEQQANMTSNEDDT
VGTTEGIMTTTFSSVDASSVGPDTPDSQDENVTENVDQQTPIVVSSTEEAVSEGSDATTM
LPLDEAETEDEAIGQEESTTESSLDQETNANDLTTVGPSSTMSSDIENEPDKPTTMETND
QEDIVTESTLEQELLEIEVSTMKQDQLTESSTGEPSTGTAVSVTDAPGTEAGTDTDSSST
MSSPIGDVEEAVTTESDGVTESGTQSSVGEDEAQGTGAPADTDMESTTMTSDEIEEESGT
MASVVEVDQGSGTTSSTDIDEESGTTTAVGVEDASTTESSVNMEVESGTMTSADINAGET
TAANDDESVTISSIDTEDDSETTTAIDIVGAGTEAPVEDEIGSGVGSVTTVQSTDLDQGL
GTTLPSVDLEEGTVTTSSPTDLEEGSGTMASIVDMEEGLVTTSSSTNLVEGPLTTSSSTD
LEDGSGTMTSIVDMEEGSGTMTSIVDMEEGLVTTSSSTNLEEGPVTTSSSIDLEEGSGTM
TSIVDMEEGSGAMTSIVDMEEGSVTTMSSTDLEGLVTTSSSIDLEEGSGTMTSITNMEEG
ALTTSQSIDVEGLASTPTVNIEESVTMSSNEIEEGNGTTEGQETEADIESTTLLPPGQGE
LPGSSSVGTDSDELSMESSGDQDSQGEEADSESTTVLDGITTTNPSFVANATDLPEPGSE
QSSISTTQQPIDQDNVVTSTTIASGTIEYCLSNGMVIQNGKDVPTSDPCKLCQCVDGDVI
CAVRECPVPEEFKNCRALPIPRDECCPQYTCDEILDDDAESDYDYDLNNQNMNVTETTTT
LGSITSDSNQSSITSTSRPTELNSTQASVTDDGSLIGLIEDILDAQAQVSSTQSPLDKID
VNDTITADTQASTGVNDPIIFPDTESSTISSLNEDASSSIASTTIVDTINSTMQLTDSDA
VVTEDPDTLLSTTETTIGTNGTTVQGGSLSNSTQDTISTTTAPEKDDSLLTSTSNDGLVT
TTIIPSVNITSGISSINTTEDTSGLVNSTTLPESVTGTTLDEIQTLTTTDASSINMTQAI
GSDGPFEGEGATEAITEVPTSTTVLSNDSTMASVSEASEASSTATSSEIAPANTTTTPAT
TTTSVIGTASSDVLGESDPQSSALAGTEQSTSEDEVSLDDYENYDQISLDQIGPGACLFD
GKIYVSAQQIPRENPCDFCFCFRGDIICLQQSCPPPIPGCNQEPIEGFCCPRYECPVKMG
LMNVTTTIAQEPPSFVQWLMGNGGADEGEEEEVTEQVRGCEIQGNFYERGAIVESASGPC
LQCRCGYNEKLECEPQPCEPAPLMKRMLTLR
NT seq
10176 nt
NT seq
+upstream
nt +downstream
nt
atgaggccctcactggcaaattcctttgctcccttggaatcctgggagaatggattggat
ttcccccaagatggctgttactaccaatatcaatattacaatgagggcgaccagatcaaa
acgaacgaaccttgcctgaactgcacttgcaagaaccagatgctcatgtgctatctcaat
gtgtgcccgttcatcaaacccgtggggaaaaactgcgtggtggaaaagcacgaggatcaa
tgttgtccaaccattatgtgccctcaagttccggtggaactttggacgagtaccacattg
cctcctccaatgttatcggacgagtcagcgatctcgtcaacttccactgatggtttcagt
gtgatcagtgcctccgcgaacatttctgccctccccatgacttccatcccaggccaaggt
tgcaatatcaatgaccaattttacatggatggaatgcaaatccccagagatcccaataat
ccttgtgaattgtgttattgcattcgaaatcacactgcctgcgtaatgcaagaatgtcga
ctaaaagtccccggatgtgagcccatcttccaagagggtgtttgttgcccagttaaatac
atgtgcaaagatggaatttactttcccggacaaggcggcctaattggacttgatggagaa
actgaaaccacggcattgcccgccaaaaacggatgctatcaaaacggaaaattcattgaa
gaaggaacgaatattgaaactcaggacccttgtgaacattgctattgtatgggaggcgac
atcatttgtgccattgatccttgtatgggcggacccttggaaggagaaactgacaactgc
attgcgcttccacccccagagggagaatgttgtactaaagaatatgtttgcacaccaaat
aatattaccgacatcttggattcggtggctacaacgactgttaccaatgatattgatcaa
aacacgggagacgaaataattctacctgagagcactgaaggagaggagaaggagccaact
gatgaaattcaagacgatgatgatgaagatctccccttagctggatttgaggacaacggt
gcaggatctcaccaaggccaaggatcgtccactttggttcaagacggtaatgaagctaac
gttacggaatcctcagaggagccacaatcctctgctcaagtaaaaccacttgattcctcg
acaatgacaccacccgaagaagctgaaggagacgaggattcacctttgaccacaaccgaa
gcagggaaagataaaaacacttgtagcttaaacggaacaacttatgatgatggtgcagat
gtcccgtctcaaaatccctgtaatggtctttgtcaatgttacaagggagccatcatttgt
gcctctgtagactgcctgccaccgcctaaaaaccatcttgattgcaagcctatttacacg
gaaggtcaatgttgtcctacctacgattgtctcgagattttggaacaagttgacccagac
gagattttagacgatgactattattctgaggatgaagaggctgtttcaacatcatcatcg
ccaattggatcaactacttcacaagagggaacaacttcaaacgaggaaatacaaaccacc
actgaaggatcagatgagattgtatcgacaaccgctccaacaacgtcagttgtgaccgat
ggcgaccaagagattttcgaaaattcaagtgataagaacgcaaccacttcagtcccattg
gtaaccacccaaagctccacaatgctggctgaaggtcaagaacaaactgaaagtgactca
gaacagagctctacagacaacgttattcctgatagtaccacaacatcaagcgattcagtg
gaactcggggaccaacaaaatgacagcgtcactcaaggtaccacggtcttagttggagac
aacgacattaccgataacttggacaacgtcgaaacgatcgtgactacctcgtcgtcccaa
attacaacaaatgaagaagaggcgacaacagtccaatctcagacatcaattgatggggaa
attcaagatgatgacgctagtgatggaatagatactgagcttacgaaccccgaagaaaca
agttccaacgagagtgttggatcaaccactcttgattcactttcaactactggccaagaa
ttggaaaccacaacagttaccggtacctctacaaccgcagacgatttggaacaagcttct
attgaaggcgttcaatcaacaactgcagcttccgcatccgttgatggagatatttcagaa
gatgatgctgaccacggagtagagtcgaagcctgttaaacctgaggaatctattggaagt
gaatcaaccactcaaggtcccgagatgacttccgatgggtctgaagcttctactcttgcg
gatgtacaatttaccactcagaattcgcaagaaattcctagtggagaaattcaagcggtc
acagaaggttcgacaaccgttgatgaggaaatttttgatgatgacacagatgaaatcgat
tctgaggtcgtaaaacccgacggaattggttccgaagactcgctaggaccaaatgaattg
gaagagtctacatctactgaaagtgctgcatcgaccactctcagttcccaatcaagcacg
gaccaggaatcggacgtcactacaattgaagacacaatttcgacgactgaatccaatgca
tcttctgtcgaagggacactagatgacaatgaggacgacgagacacctaaacccgttaaa
ccacaaggcactgattctaatgaagaacccgattcagctaccgctgattctccactcaat
actgatcaggagtcgacttcagttggcgacgctctttcgactacggcaagtccccaacaa
tcttccacgggagactcgccaacaacgaccgcagcctcagcattcgatgctggagagatt
ttggacgatgacgcagactacgataatgagagcgaggccctaaagccaatagaggctagt
ccaagtgaaagttttggatcaaccactactgactctctcatcacaactgatcaaggttca
gtgagcaccacaacggcagatattgaaacaaccacagaagacttggaacaaactactatt
ggagacattccttcaaccactggagcttccggatcagttgatgaagagaccatggatcat
gacgcaaatgatgcaacagatgaagagtcggtaaagccttcggaatccagttctagtgaa
ggccttggatccactactgttgattcaatattcgccaatgaccaggaatctgaaatcacc
accatcattggagacactgattcaactacttctagtttggatcaaattgcaatggaggca
attcaatcaacaactggagcttcagcctcagttgacgaagatatcttggatgatgacacc
gacgaagcgattgtaaaacctgcaccaggatctagttccactgaagattcgattatattt
accgagcaaccatcagaaactacaaccatgggcaacatcgtgtcaaccacggatggtttg
gatcaaactacaatggaggcaattcaatcaacaaccacagcttcggccggtattgatggg
gtgatcgtggatgatgacaccaatgaagagactgagtcaataaaacctactgaaccctct
tccagtgaagagcttggatcaactactaccggcgccgtatcatccagtagtgacgagtcg
gaaatcgatactgttgaggataacgtctccaccaccgaaggtttggaacaaacttctact
ggcgcttcgactatcattaatgcagagccaatggtcgatgaaatggtaaataattccatc
tcagagtccttgaacacgactggatcgagcatttccagtgaaggaacaaacatggacgat
tctccccaaaccaccaaccaagaagttgaatcaactaccgtttcagacacgtattctaca
acagaaaatttgcaacaagtttccactggggttccccaatccacaactgcagcatcagcg
tcaattgacggagaaatcctggatgatgatacggacaatgaaacggattttgaatctgag
acacccactgaatctagttccacagaaaagggaacagtacccgattctgtcttgaatgtg
gatgaggagaatgatactataaccactgagagttctcaactttcttccactgaagaaatt
gaatcatccactgggactgcttcattatccacgattgaagagactgaccaagccatgaaa
accgaaagccctgaaatcacgaccattagtcaatcaaccacctcatccccgacgtcatct
atcttgggagaaataagcggagaccaggaggaagagttatctacatcaacaacttcagcg
gatgaaacaaccgcacaaggaaccacgtcttcgccaatggaaccagccattcaggtttca
acctcatcagaattggaggatctgccttctgactttgacatcttagacgacgactctgac
aataatgacacttcaattatctcgacaacctcagattctatattctcgtctgtcccttcc
aacctctctaccggagaatttgaaacaacaatgggatcgattgattccacgacaaacgtc
cccgactcaaccacgaaagacatggcagcctccttcaacgactccaatgattttgtttcg
acaacgacctcatctgacttgagcacaccccttctagaatcggatgacaatgccaccact
ggcgctcctgatatgaccactggcgctcctgatatgaccactggcgctcctgatatgacc
actggcgctcctgatatgaccacggcttccgttgaacttaacaccaacaagaccgttgac
tcaagcacttcagattcgaccattgttccttccgatttttccaatgactttgacttaaca
gcctctagcacaactgtttcaatgattagttcaatgggcacagactcaacggttagcggc
ggaatagaaagcacaactgttgcaattgattccatggcctttaccaatgattcgaacact
gaagttcaggaatcaaccacactatctgcaatggagataaccacggcctttcaagatatg
tctggctcaaatgccaccattattgacttgacatcatctactcccacattaccaatcagc
gatcaagatgaaaccaatgcagatgaaattccggataatgaaaaacccgatcaagatgca
attgtgttccctgactctgctaatttgacaagtattaccagcactgcttccacaacattg
gggcagggggacaccactccaggatccattgatataacaactgcagtacaacaaggactt
caacaaacctcgacggaatcatcggtgacaaatgccagtattgacaccagtctctcttgc
ttgctctttaacaattgcaaaaatgccactaattcagaaccagaggcacttgctagcact
gtcaacaagaccgagtccattaacggaaccgatatttccacagagggagagggtagtgga
ttactttgcttgcttttcaataactgtaatgggactctcaaacccgctgaagggagtgac
aaattggactcgaacgttgtggataactcaaccgttgttacttccgactactccgacatt
ctagacgatgacagcgagtacaatccggacgaaattttagatgacgaagacggggagtct
attgactataaccaagacgaatgtgtcgtcaaaaatgaaacttatggaaactttgccgat
gttccaagcgagaacccttgcgaactttgctattgcaactatggccacgtcatttgctca
acccaaatctgtgagcccccgcaagggttcgaagactgcactcctctagagacgaaggcc
aatgaatgctgtccaaggcaatacgactgtgctgcaccatcattggagacctcaacggtc
accgttacagttggcccaagtggtgaggttgaaagtaccacagctgcgactggaattcct
ggtgaaggcaattgtctacagaatggcatttcattctccaacggatcaaccgtgcccctg
agtaataagtgccatgcctactgtctttgtgtagacagcgaaattaaatgtgatcgaatt
ccctgtcacccggctccagacgtgcctggattaaaatgcgaagaattccttattgaagga
gaatgttgtccttctcataattgcgtctccgcagagtctccggtaattgaggctggatct
tcgataacgacctccgagttggagcaacaagcaaacatgacaagtaacgaggatgacacc
gtcggtaccacggaaggaatcatgacaactactttctcttccgttgatgctagcagtgta
ggacctgataccccagactcacaagacgaaaacgtcactgaaaatgtagaccaacaaaca
cccatcgtagtgtcctcaactgaagaagccgtttcagaaggaagtgacgcaaccacaatg
cttccattggatgaggcggaaactgaagatgaagcaattggccaagaagaatctactaca
gaatcatctttagatcaagaaacaaatgctaatgatttgacaactgttggaccatcatca
acaatgtcgtctgatattgaaaatgagccagacaaacctaccacaatggagaccaatgat
caggaagatattgtaacggaatccaccctggaacaagaactacttgaaatcgaggtctcc
actatgaagcaagatcaacttacagaatcatctactggggaaccatctacaggtactgcc
gtatcagtgactgatgcacctggaacagaagccggaacagacacagatagctcgagtacc
atgtcctcacccattggagatgttgaagaggctgtaacaacggagtcagatggcgtcaca
gaatctggaactcagtcatctgttggcgaggatgaagctcaaggaacaggagctccagca
gacacagatatggaatcaacaacaatgacttctgatgaaattgaggaggaatctgggacc
atggcatccgttgtcgaggttgatcaaggatcaggaactacgtcctcaacagacatcgac
gaagaatctgggaccacaacagcagtgggtgttgaagacgcttcgaccaccgagtcgtcc
gttaatatggaagtagagtctggaaccatgacatcagctgatattaacgctggagaaaca
acggcagctaatgatgatgaatctgtaaccatttcttcaattgataccgaagacgactct
gagacaacaactgctattgatattgtaggggctggaactgaggccccagtagaggatgaa
attggatctggagtaggatcagtaacaaccgtgcaatcaactgatttggaccaaggattg
ggaacaactttgccatcagttgatttagaagaaggaactgtaacaacttcgtcaccaact
gatttggaggagggatctggaactatggcatcaattgttgatatggaggaaggattggtc
acaacctcgtcatcaactaatttagtggaaggaccgttaacgacctcgtcatcaactgat
ttggaggacggatctggaactatgacatcaattgttgatatggaggaaggatctggaact
atgacatcaattgttgatatggaggaaggattggtcacaacctcgtcatcaactaattta
gaagaaggaccggtaacgacctcgtcatcaattgatttggaggagggatctggaactatg
acatcaattgttgatatggaggaaggatctggagctatgacatcaattgttgatatggag
gaaggatcggtcacaaccatgtcgtcaactgatttagaaggtttggtaacaacctcgtca
tcaattgatttagaggaaggatctggaactatgacctcaatcactaatatggaggagggt
gcattaactacatcgcaatccattgatgttgaaggacttgcatcaacacccacggtcaat
atcgaggaatctgtgacaatgtcttcaaatgaaattgaggagggaaatggaacaactgaa
ggacaagaaaccgaagccgatatcgagtccacaacgctgttgcccccaggccaaggtgaa
ttacccggatcctcttctgttggaaccgatagtgatgaattgtcaatggagtcatccgga
gatcaggatagccaaggggaagaagctgacagtgagtctacaacggtattagatggtatt
acaaccacaaacccatcctttgttgcaaacgcaactgatttgccggagccgggatcagaa
caatcttcaatctctaccacacaacagccgatcgaccaagacaatgtggtcacttcaacg
acaatagcgtctggaaccatcgaatattgtctctctaatggcatggtaattcagaacgga
aaagacgttcccacatctgacccttgcaaactttgccaatgcgttgacggcgatgtgatt
tgcgccgttcgagaatgcccagttccagaggaatttaagaactgcagagccttgccaatt
ccaagggatgagtgttgtcctcaatacacttgcgatgaaattttggacgatgacgcagaa
agtgattatgactacgacttgaacaatcaaaatatgaacgtaacagaaacaacgaccacg
ttgggatcaatcacatctgactctaatcaatcttcaatcaccagcacaagcaggcccact
gaacttaactctacccaagcatcagttactgatgacggcagcctaattggactgattgag
gatattttagatgctcaagcccaagtttcaagcacccaaagcccattggacaaaatcgat
gtcaatgacaccataacagccgacactcaagcatccacaggcgtcaatgatcctatcata
ttccctgacactgaatcgagcaccattagttccttgaatgaagatgcaagttcaagtatt
gcatcaactacaattgtagacacaatcaattccactatgcaactcaccgattcagatgct
gttgtcacggaggaccctgacactttgttgtcaacgacggaaaccaccattggaacaaac
ggtactactgtccaaggtggttctttgtcaaactcaacccaggatacaatttccactacc
acagctccagaaaaagatgactccctgttgacatcaactagcaatgatggcttggttaca
accaccatcattcctagcgtcaatattacatcaggcatctcttctatcaacacaacagaa
gacacatctggattagtgaattccaccactttaccagaatcagttacagggactacactt
gatgaaattcaaactctaactaccaccgatgcttcatcaatcaacatgacgcaagcaatc
ggctctgatggaccattcgaaggtgaaggagctacggaggccatcacagaggttccaact
tcaactacagtgttaagcaatgactcgacgatggcgtcagtttctgaagcatccgaggca
tcgtcgacggcaaccagcagtgagattgctccagctaacacaacgactacgcctgccacg
accactacatccgtcattggaacagccagtagcgatgttcttggagaatcagatccccaa
tcatcagcattggctggaacagaacaatccacgtctgaagacgaggtttcattagacgat
tacgaaaactatgatcaaatcagtctggaccagattggaccaggtgcctgtctctttgat
ggcaaaatctatgtgtcagcccaacagatccctcgtgaaaatccttgcgatttctgtttc
tgcttccgaggcgatatcatttgtcttcaacagagctgccctcctcccattccgggttgc
aaccaagaacccattgagggtttctgctgccccagatatgaatgcccagtcaaaatgggc
ctcatgaatgtgactaccactattgcccaagaaccaccgtcttttgttcaatggctcatg
ggcaatggcggcgccgatgaaggtgaagaggaagaggtcaccgagcaagtccgaggctgt
gaaatccaaggcaatttctacgaaagaggtgctatcgtggaatcggcgtcaggtccctgc
ttgcagtgcagatgtggctataatgaaaagctcgaatgtgagcctcaaccttgcgaacca
gcgcctttgatgaaacgaatgctgaccctaaggtag
DBGET
integrated database retrieval system
