Tigriopus californicus (tidepool copepod): 131886680
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Entry
131886680 CDS
T09700
Name
(RefSeq) rabankyrin-5-like isoform X1
KO
K20129
rabankyrin-5
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131886680
Membrane trafficking [BR:
tcf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
131886680
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
FYVE
Ank_KRIT1
BTB
ANK_LRRK2
FYVE_2
BACK
Motif
Other DBs
NCBI-GeneID:
131886680
NCBI-ProteinID:
XP_059091061
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All DBs
Position
9:complement(13578171..13604684)
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AA seq
1140 aa
AA seq
DB search
MTSGSQDKDTNSVKTQSHLSLLKAELTKLQWKYQELQREHAILCAQSPHSQNDSFPSRLL
QIVAKLHKQTQYSDLQIDFADGSEPAHRFVLSARSDIWKFLDDNQNLDWTDMEPIVGRSL
LAWIYTDRVDFKAISDPDRFTLSLMKIGKSFQLLELLQYCQDYLMGSVKSTNCIQYYATA
DDIGAQALKEHCFALISTHWNEFGSEDFAEMTAPLLYSMLKSKSTHPLHEAIRLRREDVV
LLYMIEFNHELSSFVNRPDEEDKLPLDIALSTKQSGIASTLIDHRANVDQSNGNGWNLIH
LAIDRDDVFALEFLLDNNVNVNAFTPQEKNTALHLLADYPGLSPMAVKVIAKGANVNAQN
SENFTPLHLAIQRGNGEFIDVLLEHGASTEIKSSAGFPPLWYALKALEDQTTGSNGKGTN
LPEKLIAAGASVSTVCDKLGNSLLHFCAFNKLERSGLLLLEHSCDFRRANAKGETPLHLS
AQWGLESMTRQLLDLGANANAQTIMSEENAIYRQTPLHLGILNRKIGVIQAIIQKYTHME
GDSIEKRPNLDLKNSEDQTPLSLALNQGLHDIAMDLLKGGASVNVMSNKGLTLLHNAISQ
GDSEGAIFLLNHGADIDLKTMNGESPIELAIKKHLPSVVECLCRKGANLSVSSASAEVPL
WLALTEDLDTAQILVQHGVDTDAWSLGPDHCLQTLLHKAIDENLEDIACFLIRAGCDLNS
PRKEGPNGKGGEEAHDLMTPLHLCCQWGLEKTVQVLLEHGANINYRDVEGKTPLHIAIEN
SHHPIINLLLSNGRTLDLTTRDKSGLSPFATAMTFRNNMAAQSILAIHPQAAEQYDNRGR
NFLHTAIMKNDLESVLFLLSIHVNVNSRTQDANLLTPLLLAIQTGNEMIVRNLILAGAEV
EARNTSNQSGLHVAAENNLPVICGVLINEGVDVNALDNRENNALHLAVKEGHLEVIKVLL
TESNINAQAINSKGRNPLHVLAVFGKENSSGVFDLLLESIPQFPINKPDLEGNSPLLIAY
SKGNGNLCRSLVKSGAVLGSVNHEGISIFNSEVATKQLLYGLLDFLSAEPKWGEGDYCQE
CNAKFGITTRRHHCRHCGRLVCAKCSDKDTPILKYNLTKPVRVCDICADVLTVGPGMVGS
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgggatctcaagataaagataccaactcggtcaagactcaaagtcacttgtcg
ctcctgaaagccgagttgaccaaactccaatggaaatatcaagaattgcaacgagaacac
gccattctgtgtgcccaatcgcctcattcccaaaatgactcgtttccctcgcgattactg
caaattgtggccaaacttcataagcagacccaatacagtgatttgcaaattgactttgcc
gatggatccgagcctgcccatcgatttgtgctttccgcacgttcggacatttggaaattc
ttggacgacaatcagaatcttgattggaccgacatggagccaattgtgggtcgatcttta
ctagcttggatctatacagatcgtgtcgattttaaagccatctctgatccggataggttc
accttgtcgctcatgaagattggcaagtcgttccagttattggaactactccagtattgt
caggattaccttatgggatctgtgaaatccaccaattgcatccaatactatgccactgcc
gacgacattggagctcaagctttgaaagagcattgcttcgccctcatttccacacattgg
aatgaattcggttccgaggatttcgctgaaatgacggcaccgttgctttattcaatgctg
aaatctaaatccacccatccacttcatgaggcaatccgtttacgacgagaggatgtggtt
ctactttacatgattgaattcaaccacgagctctcatcttttgtaaaccgtccagatgaa
gaggataagctgcctttggatatcgcgttgtccacgaaacaatcgggtatcgcatccaca
ctcatcgaccatcgggccaatgtggatcaatccaatgggaatggatggaacttgatccat
cttgcgattgacagggatgatgtctttgctctggagttcttgttagacaataacgtgaat
gtcaatgccttcacgccccaagaaaagaacacggcccttcatttgttggctgattatcca
ggcctttcaccaatggcggtgaaggtcatcgccaaaggggccaatgtgaacgctcaaaat
agcgagaacttcactccgttgcatttggccatccaacgtgggaacggagaattcattgat
gtgcttttggagcacggcgcttccacggaaatcaaatcctcggctggatttcctcccctt
tggtacgcattgaaggctttggaggatcagaccactggatccaatgggaaagggactaat
ctcccggaaaagctgatcgctgcaggagcctctgtgtctaccgtttgcgataagctgggt
aactctctccttcatttctgtgcgttcaataaactggaaagatctggccttcttcttctg
gaacacagttgcgatttccgacgagctaatgccaaaggagagactccacttcatttgtcc
gctcaatggggtttggagtcgatgactcgacaattattagatctgggggctaatgctaat
gcccaaacaataatgagcgaagagaacgccatctaccgacaaactccattgcatctgggt
attttgaaccggaagattggggtgatccaggcaattattcaaaagtatacacatatggag
ggtgattcgatagagaagcgccccaatctggatttgaaaaactcggaagaccaaactcct
ctgagcttggcattgaatcaaggcttacatgatattgcgatggatttgttaaaaggtgga
gccagcgtgaatgttatgagtaacaaaggtttgaccttgctacacaacgctatttcgcaa
ggagattcggagggagccatattcttgctcaatcacggagccgatattgatttaaagaca
atgaatggagagtctcccattgagttagccatcaagaaacatctgccctcagttgtggaa
tgtttgtgccgaaaaggggccaatttgtcagtttccagtgcatctgctgaagttccattg
tggctggcgctaaccgaagatttggacaccgcccaaattctagttcaacacggagtggac
accgatgcctggtcactaggaccagatcattgtcttcaaactttgcttcataaggcaatt
gacgaaaatcttgaagatattgcttgctttttgattcgggctggctgcgatctgaacagt
ccccgcaaagagggaccgaatggaaagggtggggaggaagcccatgacctgatgacccca
ttgcatctgtgttgtcagtggggtctggaaaaaacggtccaagttctattggaacatggg
gccaacattaactacagggatgttgaaggcaagaccccattgcatattgccatagaaaat
tctcaccatcccatcatcaaccttttgttatccaatggtcggacgcttgaccttacaacc
agggataagtcaggtctttccccatttgctacagctatgacttttaggaacaatatggca
gctcaaagcattctagctatacacccccaagcagccgaacaatatgacaatcgtggaagg
aacttccttcacactgcaatcatgaaaaatgatctggagagtgtcttgttcctcttgtct
attcatgtgaacgtcaattctcggacccaagacgccaatctactaacgccgcttttactc
gcaattcaaacaggcaatgagatgattgttcgaaatttgatcttagccggagctgaagtt
gaggctagaaatacatccaatcaaagtggtctccatgtggcagctgaaaacaaccttcct
gtgatttgtggggttctgatcaatgaaggggtggatgtgaatgcccttgacaatcgagaa
aacaacgcccttcatttggcagttaaagagggtcatttagaggttattaaggttctccta
actgaatcgaatatcaacgcacaagccatcaattcaaaaggtcggaatccgttgcacgtc
ttagcagtatttggcaaagagaactcttctggtgtcttcgatttgctcctcgagtccatt
ccacaatttccaatcaacaaaccggatctggagggaaattctcctctactcattgcttac
tccaaaggcaatggtaacctttgtcgttccttggtgaaaagtggagcagttctaggctct
gtgaaccacgaaggaatttccatcttcaatagtgaagttgctaccaaacagctgctttat
gggctactcgatttcttgagtgccgaaccaaaatggggcgaaggcgattattgtcaagaa
tgtaatgccaaatttggcatcactaccaggcgacatcattgccgccattgtggtcgcctg
gtttgtgcgaaatgctccgataaagacacgcccattttgaagtacaaccttaccaagccg
gttcgagtgtgtgatatttgcgcagatgtgctcaccgttggacctggaatggtgggatca
tga
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