Tigriopus californicus (tidepool copepod): 131886731
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Entry
131886731 CDS
T09700
Name
(RefSeq) tetratricopeptide repeat protein 28-like
KO
K24936
tetratricopeptide repeat protein 28
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tcf03037
]
131886731
Cilium and associated proteins [BR:
tcf03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
131886731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_7
CHAT
TPR_2
TPR_8
TPR_10
TPR_16
TPR_14
TPR_MalT
TPR_19
TPR_11
TPR_17
TPR_9
RPN7
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
131886731
NCBI-ProteinID:
XP_059091115
LinkDB
All DBs
Position
9:complement(1580791..1614123)
Genome browser
AA seq
2510 aa
AA seq
DB search
MDGQSPSLALSAAMSDNANKTLFLEKVRDSNHACQAGDFKLAVRLYTEAIALDPGNHILH
SNRSAAYIKMGQFPKALQDAIRARDLNPEWPKAYYRQGVALQCLGKHSDALAAFANGLAQ
DPKSLQLLAGLIEAAMKSPLKGTLEPTYRQLQMMKLDKSPFVIISVIGQELLAQGRYSSA
VEVLESALKIGTCSLKLRGSVFSALSSAYWALNSLDKAIGYMQQDLVVAKQLSDIPGECR
AHGNLGSAYFSKGNYKEALTSHRYQLVLAMKCKDSHAASTALTSLGHVYTATGDYANALA
SHKQCVELVQQLNDRVQEARETGNVGAVYLAMGDFDKSVECHRKHLEIAKSLANKVEEAR
AYSNLGSAYHYKRSYEQAVMFHNQVLHLAQELKDKAIEARAYAGLGHAARCMGQHLQAKV
WHEKQLDMALVTKDKVAEGRACSNLGIVYQLCGDHDAALKLHQAHLNIARVLHDRAGMGR
AFGNIGNAYSASGFYEQAIKYHKQELTISKEVCDRNSEASTHGNLAVAYQALSMHEMALV
HYHSHLNIARELKDSAGEALALCNLGNCHSSRGEFTQAVPFYENYLMLSQELNDVEGEAK
ACHFLGYAHYCLGNYKEAIRYYDQDLALARDQQDRMNMGRAYCNLGLAHLAIGNFESALE
CQKYFLAIAQVMKHNQGKFRALGNMGDVLLKMEDQLEEAISVYQKQLGLAKQIRDKGFEA
SAYGSLGICHRHAKLYDKALGFHTQELSILQDIADMRGECKAHGNLGAVHLSLGNYINAM
KCYQEQLERAQDIKDSAMEAQSQGNLGLTKINLGRHEEAIGCFEQQLAALEQVISPSSPP
SFLLEKGRAYGNLGSCYEALADYEESIKCHEHHLDISLKLKAIKDQDRAYRELGLAHKNL
GNLQQALVCFEKRLVVAHDLSKINAKGTAYGDLGEIHALLGNFEQALSCLDHQLNSARSS
NDRLSEAESASGLGMVHQKMFQWNSALQYHQLDLDISQANDHKDGQLRAMANIGATYEGM
EDMDKALIAHENYLDLALQTNDITAQTRSLGGLGRLQHRLGNLEEAIAYLGRGLNLAEQS
NRREDEARIRHRLGVIHWQIRNLDHSYEHLERAALLFETFRREAKGTSDYKLSLFDLQTE
CYHILQRVLVHLGRENEALVVAERARTRAFVDLLLERQSSPGSNATSRLSRLDESTPSSV
NEIVSLVNRQNASVLYYSLAAGYLFVWLIIPTKGIVKFHQVCVSPEEGEENDASKGAMLE
ENIHSIREALGIQNSNMTYSGSRGDDENENGGGVDDLWSSHLDALGDKLNQESDRSGFLR
MVNRSSRLNASSYSLSSLFSVGSVGAGSTMSGLTASSRHSTRSRRGWQGPSCLKKLYKVL
IEPMEDELPENYPCELMLVLEGDLYLVPFAMLKGPTSTECLCERFSLITSPSLTSIKTSR
SKNSKNSDQASAIVVGNPKIPSTISDQWGWGDIPSSGQEASIVAEIMQSGALTAEKATKE
AILSQISQAECIHFSCHVSWKLSALVLCPGEFVESKSSLSGTSPTGGVANKRYSIHSDTI
HEEEDVRSEVASSTLDMPSLSEFLLTAADILNLKLNAKLVVISSCYTKDEHGQITSDGLI
ALTRAFLAAGAQTVMVSLWPVPSTAVKLIMKAFYSSMLQGSRVSKALAEAMTTVQNTKQL
QNPTNWAGFTIIGVDVKLTNKVALMGQALREILHTPESCRDALRVTLHLVEKSLQRLNRG
YKNAMYTSQKSIENKVGSVDGWKDLLISVGFRFEPEANNIPASVFFPQSDPGERLAQCSA
SLQAILGLSQTSWVALSKLLASQEEADEIIALFRTVSVNMHADEAGVQVPVNVKLWQLQG
CHELLASLGFDLMEVGKDDVILKTGKTANKRQIQFALQALVALFDTQDAPRSVEMDESSN
SSLAEEDPESEHETEDESVDMISPASPFPLPRKSGVVLDGASGAFSSYVRSRGEPDGRQA
GLNDSPPHPAFPQTSIPPPPVPPLPPMVLYQTHSKGHESDCNFTPSPVNPVPKSFLRNSY
ALGSPHHHNHAGPFAYGKRLSRNTMATPTEDKADSSSSNASSLADWSPAKNLVKKPNLHP
IIQSRLDQALQEMSSVTNPGRPQGIYENHDMQQYSVKQPAGKPLMPIRSVFTDVGYHANQ
KITDKSDPNDKFSVRAETTKTISRKVERPVPADSRLNPGVTRRMPPTGESGSPESTLNQK
RSSIAADTVSLTSSTNTFIVKSDDGNSSDARIDLSEINIHDSLRRSQFRDLRRDNPISEV
YHERNIGLDLAPPLASIIMSNNLQVVQVDHHSDSEGSTKTLNKSGTSPNVEESMNSFDQP
ATIEKAHANLKLPPPMKRRPPIPPKPLTDSKIMDPRIVMTRDEGDGRSMTDSQYSGYSPN
GQALSPGGATSADNNLASKIGYLRIQDYMNNQEIAVIEENEGEGNAAMKPKDIANYINTQ
FKMPNQNETANLAINQSGSSFDGNTKHPHNLWSRDPNGGLRYTGLFSSDC
NT seq
7533 nt
NT seq
+upstream
nt +downstream
nt
atggatggccaatcaccttcattggcactctcggctgccatgtcggacaatgccaacaaa
accctctttctggagaaggtccgggattcgaatcacgcctgccaagcgggagatttcaag
ctggcagttcgattgtacacggaggcaatcgcattggatcctggcaatcacatcctccac
tccaatcgatccgctgcttacatcaaaatgggacaattcccgaaagccttgcaggacgcc
attcgggcgcgagatctgaaccctgagtggcccaaggcctattatcgccaaggtgtggct
ctgcaatgcttgggcaagcactcggatgccctggccgcattcgctaatggactggctcag
gatcccaaatcgttgcagctcctggctggactcattgaggcggccatgaaatcaccactc
aaaggaaccttggagcccacatatcggcaacttcagatgatgaagttggacaagtcgcct
tttgtcatcatatctgtgattggccaagagcttctggcccaaggaaggtactccagtgcg
gtcgaggtgttggaaagtgcccttaaaattgggacctgcagcttgaagctccgaggatcc
gtgttttccgctctgtcctcggcctattgggctctgaacagcctcgataaggccattggt
tacatgcagcaagacctggtggtggccaagcagttgtccgacattcccggagagtgtcga
gcccacggcaatctgggatcggcctacttcagcaagggcaactacaaggaagcgctcacc
tcgcatcgatatcaattagtgcttgccatgaaatgcaaagactcgcatgcggcatccacc
gccctcaccagtcttgggcacgtctacacggccacgggagattatgcaaatgccctggcc
tcccataaacaatgcgtggagctcgtgcaacaattaaacgatagggtgcaagaggcgcgc
gagactggcaacgtgggtgccgtctatctggccatgggagatttcgacaagtcggtggag
tgtcacaggaagcatttggaaattgccaagtcactggccaataaggtggaggaggccaga
gcctacagcaacctgggatcagcctatcattacaagcgaagttatgagcaggctgtgatg
tttcataatcaggtgttacacttagcccaagagctcaaggacaaagccatcgaagcccga
gcctatgccggactcggacacgcagcccgttgcatgggacagcacctccaagccaaagtc
tggcacgaaaagcagttggacatggctttggtcaccaaagacaaggtggcggaaggccgg
gcttgctccaatttgggcatcgtctaccaattatgtggagaccatgacgcggcactcaag
ctccatcaggcccacttaaacattgcccgagtgttgcacgaccgtgcaggaatgggtcgt
gcctttggcaacatcgggaacgcctactcggccagtggcttctacgagcaggccatcaag
taccacaaacaagagctcaccatatccaaggaggtgtgtgatcgaaattcagaggcatca
acccatggcaatctggccgtcgcctaccaggccctctccatgcatgagatggctcttgtg
cactatcatagtcatttgaatattgcccgcgagctaaaagattcggctggtgaggccctg
gccctgtgcaacctgggtaattgtcattcctcaaggggcgagttcacgcaagcagtgccc
ttctacgagaactatttgatgctctcccaagaattgaacgatgtggaaggcgaagccaaa
gcttgccattttctcggctatgcccattattgcctggggaattacaaagaagccattcgt
tattacgatcaagacttggcactcgctcgagatcaacaagatcgcatgaacatgggccga
gcctattgcaatttgggcttagcccacctggccattggcaactttgagagtgcactggaa
tgtcaaaaatacttcttggccatcgcccaagtcatgaagcacaaccagggcaagttcaga
gcattgggcaatatgggcgatgtgctgctcaagatggaagatcaattggaagaggccatc
tccgtgtaccaaaaacagctcggactggccaaacaaatcagggataaaggcttcgaagcc
tcggcttatggctccctggggatctgccaccgccacgccaaattgtatgacaaggccctg
ggatttcatactcaggaactctctattctccaagacattgcggatatgcgaggggagtgc
aaggcccacgggaacctgggggccgtgcatctctctttgggtaactacatcaatgccatg
aaatgctaccaggaacaactcgagcgggcccaggacatcaaagactcggccatggaggcg
caatcgcagggcaatctgggcctgaccaagatcaacttggggcgacacgaagaggctatt
gggtgcttcgagcaacaattagcggctcttgagcaagtcatatcgccctcgtcgccaccg
agctttctcctggaaaagggccgggcctatggtaatttgggctcatgctacgaggccttg
gctgactatgaggaatccatcaagtgccatgaacaccatctcgacatcagtctgaagctg
aaagccatcaaagaccaggaccgagcctaccgtgaactcggtctggcccataagaacttg
gggaaccttcaacaggctctggtttgcttcgaaaagcgtctcgttgttgcccacgatttg
tccaaaatcaatgctaaaggcaccgcctacggagatctaggggagatccacgccctcttg
ggtaactttgaacaagcattgtcttgtctggatcatcagctcaactcagctcggtcgtcc
aatgaccgtctatcagaagctgaatcggcatctggattggggatggttcatcagaaaatg
tttcaatggaactcggcattgcaatatcaccaactggatctggatatctcccaagccaac
gaccacaaggacggtcaactcagggccatggccaatataggcgccacttacgagggcatg
gaagacatggataaggccctgattgctcatgagaattatctggacttggctctacaaacc
aatgacatcacggcccaaacaagatcattagggggtctaggtcgtcttcaacatcgtctg
ggtaatctggaagaagccatcgcttatcttggtcggggtctaaatttggctgaacaatcc
aatagaagagaggacgaagctcgcattcgacatcgtttgggggtcattcactggcagatc
agaaacttggaccattcctatgagcatttggagagggccgctttactttttgagaccttc
cgtcgagaagccaaagggacttctgactacaagttgtcgctctttgaccttcagaccgaa
tgctaccacattcttcaacgggtattagtgcacttggggcgagaaaatgaggctcttgta
gtggcggagagagctcgaacgagagcattcgtggatctacttttggagcgccaaagttcc
ccggggtcaaatgccacctctcgtttgagtcgcctggacgagagcacaccttcatcagtc
aatgaaattgtcagtctggtcaatcgacaaaacgcctcggttctatactacagtttggcc
gccggttatctcttcgtatggttgatcatccctaccaaaggcatcgtcaaattccatcaa
gtatgtgtgagccccgaggaaggagaggagaatgacgcgtcaaaaggtgccatgctggag
gagaacatccatagcatcagagaggcgttaggcattcagaattccaacatgacttactcg
ggctctcgaggagatgacgagaacgaaaatggagggggcgtggatgacttgtggtcctcc
catctggatgccttgggcgacaagctgaaccaggagagtgatagatccggattcttgagg
atggtgaatcggagctcgagactgaatgcatcctcgtattcgttgagctcgttattcagt
gtgggcagcgtgggggcggggagtaccatgagtggcttgaccgccagttcccgacacagc
actcgctctcgacgtggatggcaaggaccttcgtgcttgaagaaactctacaaggttctc
attgagcccatggaagacgagctacccgagaactacccctgtgagctgatgctcgtgctg
gaaggagatctatatctcgtgcctttcgccatgttgaaaggccccacgtccaccgagtgc
ttgtgcgagcgtttcagtttgatcacgtcaccttcactcacctcgatcaaaacatctcgc
tccaagaatagcaagaattctgatcaagcctcggccattgtggtgggaaatcccaagatc
ccaagcacgatcagtgatcaatggggatggggtgatattccctcttcagggcaggaggcc
tctattgtggccgaaatcatgcaaagtggagcactgacagctgagaaggcaacaaaggag
gctattctcagccaaatatcccaagctgagtgcatccatttctcctgtcatgtgtcatgg
aagctctccgctttagtgctctgtccaggagaattcgttgaatcaaaatcgtcattaagt
gggacctctccgacaggaggcgtggccaacaagcgttattccatccattcggataccatt
catgaggaagaagacgttcgatcagaggtggcttcttccactttagacatgccttctttg
tctgaattcttgctcacggctgccgacatcctcaacctcaaactcaatgccaagcttgtc
gttatttccagttgctacacgaaagacgaacacgggcaaatcacttcagacggacttatc
gccttgaccagagcctttttggcagctggagcgcaaaccgtgatggtctctctctggccg
gtgcccagcactgccgtcaaactcatcatgaaagccttctattcatccatgctccagggt
tcacgggtgagcaaagccttggcagaagcaatgactaccgtccaaaacacgaagcaactt
caaaaccccaccaattgggccgggttcaccatcattggagtggacgtgaagctgaccaac
aaggtcgctctcatgggacaagccttgagggagatccttcacacccccgagagttgccga
gatgcgttgagggtcactttgcacttggtcgaaaagagcctgcagagactcaaccgggga
tacaagaacgccatgtacacgtcgcaaaaaagcatagagaacaaggtcggatctgtggac
ggttggaaggatctgctcatctcggttggatttcgatttgagcccgaggccaacaacatt
cccgcgtcggtgttcttccctcaaagtgacccaggtgaaagattggcacaatgcagtgcg
agccttcaagccatcttagggctctcccaaacctcgtgggtggccctgtcaaaactcttg
gccagtcaagaggaggcggatgagataattgccctctttagaactgtctctgtcaacatg
catgctgatgaagcaggtgtacaagtacccgtcaatgtgaagctctggcaattgcagggt
tgtcatgaattgctagcatccttgggatttgacctcatggaagtgggcaaggacgatgtt
attctaaaaaccggcaaaaccgccaacaagaggcaaatccagtttgccctgcaagctctg
gtggcgctcttcgacactcaggatgctcccagatccgtggaaatggatgaaagctcgaat
tcgtccctggcagaagaggatcctgaatctgagcacgagaccgaggacgaatccgttgat
atgatctcaccagcatcgccgttcccacttccacgaaagagtggtgtggtccttgacgga
gcctccggagcattttcaagctatgtcagaagtcgcggagagcccgatggtcgacaagcc
ggattaaacgattcacccccacatccggctttccctcaaacgtctattccacctccaccg
gtcccacctctaccaccgatggtcctttaccaaactcatagcaaaggccatgagagtgat
tgtaattttacaccaagtccggtcaatccggtgccgaagtctttccttcgaaactcatat
gcccttggatcacctcatcatcacaaccatgctggaccatttgcttatgggaaacgccta
tccagaaacactatggcgactccaactgaggacaaggcggattcttctagcagcaatgcc
agttctttggcagattggtccccagccaaaaatttggtgaagaaacccaatctacatccc
atcattcagagccgcttggatcaagctctgcaggaaatgagcagtgtgaccaatcctggc
cgacctcagggtatttatgaaaatcatgatatgcaacaatacagcgtgaagcaaccggct
ggaaaaccactgatgcccattcgtagcgtgttcacggacgttggttatcatgctaatcaa
aagatcacggacaaatcggatcccaatgacaaattcagtgttcgagctgagaccactaaa
acaatctcgagaaaagtggaacgccctgtccccgcagattctcggctcaacccaggggtc
acacgaagaatgcctccaactggagaatcaggcagtcctgagagcactttgaaccaaaaa
cgatcctccatcgccgctgatacggtttccttgacttcaagcacaaatactttcattgtc
aagtcagatgatgggaactcatccgatgccaggattgatttgagcgagatcaacatccac
gacagtcttcgtcgaagccaattcagagatttaagacgagacaatcctatctcagaggtt
tatcacgaaagaaacattggtcttgacctcgcccctcccttggcttcaatcattatgtct
aacaatcttcaagttgttcaggttgaccatcactccgactctgaaggttccaccaaaacc
ttgaacaaaagtggcacttctccaaatgtggaggagagcatgaacagcttcgaccaacca
gcaaccattgagaaggctcatgccaatttgaaacttcctccgcctatgaagagaaggcca
ccaatcccgcccaagcctttaacggactctaagatcatggatcctaggatagtaatgact
cgagatgagggtgacggtcgctccatgactgattcgcaatattccggatattccccaaac
ggacaagctctctcaccagggggagccacttctgccgacaacaatttagcctccaagatt
ggttatctccgaattcaggactacatgaataaccaagaaattgctgtcattgaggagaat
gaaggcgaaggtaatgcagccatgaagcccaaagacattgccaactacatcaacacgcag
ttcaagatgccgaatcaaaatgaaacggcgaatttagccatcaaccaatctggtagctcg
tttgatggaaataccaaacacccccacaacctttggagccgagatcccaatgggggtcta
cgttatacggggttgttctcatcagactgttga
DBGET
integrated database retrieval system
