Tigriopus californicus (tidepool copepod): 131886752
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Entry
131886752 CDS
T09700
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tcf01002
]
131886752
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131886752
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131886752
Peptidases and inhibitors [BR:
tcf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131886752
Ubiquitin system [BR:
tcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131886752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
DUF3517
UCH_UBL1
UBA
UBA_7
DUF6179
Motif
Other DBs
NCBI-GeneID:
131886752
NCBI-ProteinID:
XP_059091132
LinkDB
All DBs
Position
9:complement(9955071..9964376)
Genome browser
AA seq
2814 aa
AA seq
DB search
MRPVQPYSLNQSSGRDRHAKRQAHRGFPGLSPLSPSQTHAHARVFRLDRPHPEQVKQVKQ
AEEGHRHPFPPCPLRVIHRSRWTPPNRDLRVRPAGLAALRPGGSSSTAVTIASKGRKRAW
RAEAEAQEDRERRQNQPEPLDRERKAEDEGQGGGPPRPVNGRHPRPTRDYSGRSPRRRRR
QNRKSQSSRSPSHSPGRPNRVDTPRPTSLSAAPASTSAATTTLSSSSSSSTSTSTMTTEL
SSDFDENLSTLLSMGFPDLDEIKRALKTSKNDLVEAVSILTNDVPSISSKRDHSDFSSGS
NAGSTQDAKIGPENMEQDETGFPVGNLYELETRVFQENWSIPYKREESLGKCLVGATKLA
QDGLMDSHEQCTRFIDKILPEAFRKLLSSNATQRWQIEIQEGIQDMLFLLIDLVLARVSG
EPLPYGLLQILTLAFDIKNGWNYTNRQRHSRLWESANRTTPAVVFAQPLEASRSHEYEWL
CDLLNHFGQSNGFKIFIDLIDKYESDGKLDVRVLAALLTPFGGCAEILVQSEVDPMLGPC
LDKTFKVIEHLQDSDIRGKEITAVSDLLTSLKLICHHFKSSKSDFCDDQRLGIILRMLKT
PHFSSKMNALKEVSRLIDESADRNRGLSVEQVVDWMVENQVLSVTLEGNIDQVQYTDRIK
SIVEFLGPRLSLEELTKMWKLQESSNAHVTDNIYAIMSGAAAKFNMSQFDHLTALIKETW
QNATDRVREKLLVLIGQIGKEATQSKSTRAILEVLWEISHVDGLPRPLVENALKEQLAIL
AEMTVNKVAVRKIYILKCIDDIKASTRHAVSSVKHLHDICRTFSKGTSFYQKADKSTLGE
LNQQHEIVKCLSMSLQQCLDKADKTAPILGPSNQLLHSHSELISCHLDLLAFLLKEGDLY
LSWSRCKELWNTLIINPNTTSKDKDDLFVWFETCISDLEQNTLLDLFKLKMLSFDPADIT
EKAFSCFKALFEIINVAKGFLKKSTSSSLIVENRELVGMSYLWKIVSECESDEIADKAID
YLLKTSYFNLSSSLKANLVELHQDFFTSCYGLLDVALRSSSVTEGVERGLEIEAARRSSF
SETLTTVRISNLSILPLDLKGKTLRTVSRIFLLLECYISRIEELFPGERTLLPHVAAFHG
SGVEINVVHESKNEEHQVLTHTNEYIGNIKKRISAETGVVTDNLKLFLDDVEISSAKNKC
FLHSLSSEPEQKWTLKAQGGTSTALVLFQDSVSPNQKNGGDLFDAMTSSTSSGEDSNTAL
EQMEKELPGVVMALKGKIFWVLNHLSSINDRQVVQRLRKLIHIIPTDSAVLDNLDSVSYY
FALAGSSRAADASPKMSPRFKKAPDVLESLESVRDCLSKLFDPTTEGMGAFKLLYNLEVL
SGRLMPTKNDTVLASAAQKFSNHFVQAGGLELILHVLDRQAMAPDVDYDLRQSVYLITLQ
IAHHLLCGQPAKLQMCTITSPGMKPTPPKRSALDSSLSTSKSPSVISATKKVQTMKDDQF
WTMITCLMRVIWAAAAGNLQLATSSMSKPKLGDHPRFQLGRRSRDSSTGSSGSEGSSSEA
APSLHSGVCSQQSFVNDGDCRIAGGAFELMITCLEMRTLSIAKFFTLPLVSDFIVDIVLG
SQSGFVRRKACQQLIRLTNIRVAARSLNLDNLESKGPLTPKQLLTKVILKSPVPLWMPSS
KSRGISPIILSHSAEYFDLRCALLRSLDLREQKEFEVNAKTMIDDELTFLQNFTVSNRFE
DCTLLAGHLKLVETLLTCEGIDKKKLGKKLVFNLLASFLFPASRIRTDASDPCSRKQNLN
FNPKCDNTESRVAAYNLLIQLAKGCSSNASLIVGELIQIHHFFNENQLKEFDNEPSVERR
ADSNFVGLKNAGATCYMNSVLQQLFCTPGICEQVLSMNIDNYEEDTIYYQLQNVFGHLKE
SQLQFYKPEKFWRCFRLYGQPVNVREQQDAFEFYTQILDQADEHLAKFNKAKTFKAQFEG
VFSDQKICQGCPHRYEREETFMALNLPVKSNNLQESLDQFVKGELLEGDNAYFCEKCKVK
RNTVKRMCIRTLPPTLVIQLKRFHYDWETNRSLKFDDVFQFPWTIDMGPYTTEGIHLKEK
ASPNELAIELGKEPYRLVGVLVHSGQASAGHYYSFIKERRSKNISGSNHGKWFKFNDTTV
EEFDMNNDSLTTECFGGNYKVKKDDSNTSNSHLPEERQRYWNAYMLFYEYTGSPSTKSGK
MPRKNSSQSQSRLSARKNARKTSEPAIPPRESFSQLSDLVVKGEEKGIFLNKMPPPIERD
IQEENLRFLENRDVFCREYYTFITELIQVNMTRKPQMSDDEYDQLGTYSLRLGIHFLLNT
YFHLKRKDSALIGEIVNACQSLCRSSLKCCDWLLSFLIGEGQVYLRPFLIECPSKEVRHN
SARIVLMAMEFYEKHHGSDQDEKVASLLVHVVSILSQDVPNHGKHSGQFFWLLSQYARLG
PKHCQKLFNLNAFSHVFKFLLGCEPEPENPEDLLNQRRRWTGLQIRDFGEVHLVLAHMIL
SCDLTKHRDIIDDSKPPDSVASNVARAHGDSSEGRNPMPSTLTNVLFGAIAPLFIRECIC
AIKEDNTEGVGPIMEMLVQVAFKDSKFSENLISELLKQYSNANPGELKNLSSLLCDILVL
QDSFQGDRVKYVIEGKESSSVEGLLTLVTNNQSSESRTYQCIKTLVVASNRSSAVKDYLL
QDSKRWEWAVNWLKSKMSDDFNWNSNEDVVSNEDSNIRTFHRTTSAQVTLDEANAILAEF
GGTKSPKELLVPSCSRSISTTKKTAASLSTGTQSHCEGMETDQKCEDEEMPEHS
NT seq
8445 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggtccagccttacagcctcaatcagagttcaggccgagacaggcacgcgaaa
agacaggcccacaggggatttccaggactaagcccactaagccccagccagacacatgca
cacgcccgagtgtttcgattagaccgtccacacccggagcaggtcaagcaagtcaagcag
gccgaggagggccatcgccacccattccccccctgcccgcttcgagtgatccaccggtcc
aggtggacgcctcctaaccgtgatctaagggtccgacccgccggactggctgcgcttcgc
cccgggggttcgtcctcgacagcggtaacgatcgcgtcaaagggccggaaacgcgcttgg
cgggctgaggccgaggcccaggaagatcgggagagacggcagaaccaaccggagcctttg
gatcgagagcggaaggcggaggatgaaggccagggaggtggaccgccccgcccagtcaac
ggacgccacccacgcccgacccgggattattccggtcgaagtccgcgtcgtcgtcgccgc
caaaatcgcaagtcacagtcctcgcgctcgccttcacactcgccaggccgaccaaaccgg
gtagacacaccccgtccgacctcgttgtcggccgcccccgcctctacctctgctgccacc
accaccctgtcctcgtcctcgtcgtcgtccacctccacctccaccatgaccaccgagctg
agttcggatttcgatgagaatctctcgaccttgttgagcatgggctttccggacttggac
gagatcaagcgggccttgaaaacgtccaagaacgatctggttgaagccgtatcgattctc
accaatgacgtgccgtccatttcgtccaaacgcgatcactcggatttctcgtccggttcc
aacgccggatcgacccaagacgccaagatcgggcccgaaaacatggagcaggacgagacc
ggctttccagtagggaatctgtacgagctagaaactcgcgtgttccaggagaattggagc
attccatacaagcgcgaggagtccttgggcaaatgtttagtgggggccactaaactagct
caagatggtctgatggactcccatgagcaatgcacccgtttcatagacaagatcctaccg
gaagcctttcgcaagttgctctcctctaatgccactcagcggtggcaaattgagatccag
gaaggcattcaagacatgctcttcctactcattgatctggtcctggcccgagtcagtggc
gagccattgccttatggcttgttgcaaatcctcacattagccttcgacatcaagaacggt
tggaactacaccaatcggcaacgacactcgcggttatgggaaagtgctaatcgaaccacg
cccgccgttgtgttcgctcagcctttggaagcgagtcggagtcacgagtacgagtggttg
tgcgatctgctgaatcatttcggtcaatccaatggattcaagatcttcatcgatttaatt
gataaatatgagagcgacggcaagttggacgtgcgtgttctggccgccttgctcacaccc
tttgggggttgtgcggaaatactggttcaaagtgaagttgaccccatgttagggccgtgc
ctagacaagacttttaaagtgattgagcatctgcaagactcggatattcgaggtaaagag
atcacggccgtctccgatttgctgacatctttgaagctgatttgtcatcacttcaagtca
tccaagagcgatttttgtgatgatcaaagactcggtatcatcttgcgcatgttgaagacc
ccgcatttcagttcgaagatgaatgccctaaaagaggtgagtcgtctcattgacgagagt
gcggatcgaaaccgaggtttgagtgtggagcaagtggttgattggatggtggaaaaccaa
gtcctgtctgtgaccctcgaaggcaacattgaccaagttcaatacacagatcgaattaaa
tcaatagttgaattccttggacctcgactctccttggaggaattgaccaagatgtggaag
cttcaagaaagctcgaatgcccatgtgacggataatatttacgccatcatgtcgggcgct
gcggccaaatttaacatgagccaatttgatcatctcacggcgttgatcaaagaaacctgg
caaaacgccacagatcgagtacgagaaaaattattggtcctgattggccaaattggcaaa
gaggccactcaaagtaagtccacgcgagccattctggaagtgctatgggaaatatcccat
gtcgacggattgcctcgtcctttggtggaaaatgctctcaaagaacaactagccatccta
gccgagatgacagtgaacaaagtggctgtgagaaagatttatattttgaaatgcatcgac
gatatcaaggcgagcactcgacacgccgtgtcctccgtcaaacacttgcatgacatttgc
cggactttctctaagggaacttcattctatcaaaaagccgataagagcaccctcggcgag
ctcaatcagcaacatgaaatcgtcaagtgcctttccatgtcccttcagcaatgtctcgat
aaagccgacaagaccgcccccatactgggaccctcgaatcaacttctgcattcacatagc
gagctcatctcgtgtcatctggaccttttggccttcttgctaaaagagggcgatctctat
ctgtcatggagccgctgtaaagagttgtggaacactttgatcatcaaccccaacacaaca
agcaaggacaaggatgatctgttcgtttggtttgagacttgcatcagtgatttagaacag
aacacattgctagatttgttcaagctcaaaatgttgtcctttgacccagctgatatcact
gaaaaagcctttagctgcttcaaagccttatttgaaatcatcaatgtggcgaaaggattc
ctgaaaaagtccacttcttcgagcttaatcgttgaaaatcgagaactggtgggcatgagc
tatctctggaagattgtgtctgaatgcgaatcggacgagatcgccgacaaggccattgat
tatttgctcaagacgagctacttcaacctgagttcgtctctgaaggccaatctggttgaa
ttgcatcaggattttttcaccagttgttatgggcttttggacgtagccctaagatcctcg
agtgtgactgaaggagttgaacgaggattggaaatcgaggccgctcggcgatcctcgttt
tcggagacgctgaccactgtcagaatatcgaatctctccattctgcccttggatctcaag
gggaagaccttgagaaccgtttctagaatatttttgctcctggagtgctacatctctcgc
attgaagagctatttccaggcgaaagaacccttctacctcatgtggctgcttttcatggg
agtggcgtggagatcaatgtcgtccacgaaagtaaaaatgaagagcatcaagtcctgacc
cacactaatgaatacattgggaacatcaagaaacgaatcagtgctgaaactggggtggtc
acggacaatctgaagttgtttttagacgatgttgaaatttcgagtgccaaaaacaagtgc
tttctacattccttatcgtcagaaccggaacaaaaatggaccttgaaagcccaaggcgga
acctccactgcgttagtgcttttccaagattcggtttcgcccaatcagaagaacggaggt
gatctctttgatgccatgacatcttccacgtcgtcgggagaggattcgaatacagccttg
gagcaaatggaaaaggaattgcccggcgttgtgatggccttaaaaggaaagatcttctgg
gtgctcaaccatctctcatccatcaatgaccgtcaagtggtacaaagacttcgcaaactc
attcacatcatacctacagattctgcagttttagacaatttggactcggtgagttactac
tttgccctcgcaggctcctccagagcggccgatgccagtcccaaaatgagtccacgattc
aagaaagcgcccgacgtcctggagagtctggaatcggttcgagactgtttgagcaaactc
tttgatcccaccaccgagggaatgggcgcattcaagcttctatacaatctggaagtgtta
tcagggcgtctaatgccaaccaaaaacgacaccgtcctggcgagtgcggctcaaaagttt
tcgaaccactttgttcaggctggaggattggaattgatcttgcacgttctagatcgtcaa
gccatggcccctgacgtggactatgatctccgacaatccgtgtaccttatcactctgcaa
attgcacaccacctactctgcggccagcctgctaagcttcaaatgtgcaccatcacttcc
ccgggaatgaagccaactccgcccaaacgatctgccttggattcatccttgagtacatcc
aaatcgccctcggtaatatcagccaccaagaaagtgcagaccatgaaagatgaccaattc
tggaccatgataacatgtttgatgcgcgtgatttgggctgctgcggctggtaatcttcaa
ttggcgaccagttccatgtccaagcccaaattgggcgatcaccctcgatttcagttgggt
cggaggagtcgtgacagttccaccggaagttcgggaagtgaagggagctcatctgaggct
gcaccaagcttacactcgggtgtgtgctctcaacagagttttgtcaatgacggcgattgt
cgaattgccggtggagccttcgagctgatgatcacctgtctagagatgcgaaccttgagc
atagccaagttcttcaccctcccgttggtgagcgacttcattgtggacattgtcttgggc
tctcaaagtggctttgtccgtcgaaaagcctgtcagcaactcattcgactcacgaatatt
cgtgtggctgctcgttctttgaacttggacaatctagagtccaaaggccccctcactccc
aagcaattgctaaccaaggtcatcctcaaaagtccagttcctttgtggatgccctcgtca
aagtctcggggaattagtcccatcatcttgtcccatagtgcggaatactttgacctgaga
tgtgcacttctgcgaagcttggacctacgagaacagaaggagttcgaagtcaacgccaaa
accatgatcgatgacgagctgaccttcttgcagaatttcaccgtgagcaatcgattcgag
gattgcactctcttggcaggccatttgaagctagtggaaacattgctgacgtgcgagggg
atagataagaagaaattgggcaagaaactcgttttcaatctcctggcttcgtttctcttc
cccgcttctcggattcgaaccgacgcctccgacccgtgctctcgcaagcagaacttgaac
ttcaatcctaaatgcgacaacaccgagtctcgtgtggccgcctataatctgctcatccaa
ctcgccaaaggctgtagtagtaatgcctccttgattgtgggagaactaattcagatccac
cattttttcaatgaaaatcaactaaaagaattcgataacgagccgtcagtggagcgccga
gctgattccaattttgtcggtttgaagaatgccggtgccacgtgctacatgaactccgtc
ctccaacaactattttgcaccccgggaatttgcgaacaagttctgtccatgaacatcgac
aactacgaggaagataccatctactatcaattgcagaatgtgtttggtcatctaaaggaa
tctcaattgcagttttacaagcccgagaagttctggcgctgtttccgattgtacggacaa
cctgtgaatgttcgagagcaacaggatgcctttgagttctacacacagattttggaccag
gccgacgagcatttggccaagtttaacaaagcgaagaccttcaaggctcagtttgagggt
gtgttctccgatcagaagatctgtcaaggatgtcctcatcgatatgaacgagaagagact
ttcatggcgttgaatttacccgtcaagtcgaacaatctccaagagtctttggatcagttc
gtcaagggcgaattgcttgaaggtgacaatgcctacttttgtgagaaatgcaaggtcaag
aggaacacggtcaagcgaatgtgcatccggaccctgcccccgacattggtcattcagctc
aaacggttccattacgattgggagacgaataggtccttgaagtttgatgatgtcttccaa
ttcccatggacgatcgacatgggtccttacaccactgaaggtatccatttgaaagagaaa
gccagtcctaacgagttagccatcgaattgggcaaggagccttatcggttagtgggcgtt
cttgtccatagtggacaggcaagtgcgggtcattactactcgttcatcaaagagcgcagg
tccaagaacatctcgggatcgaaccacggcaagtggttcaaattcaacgataccacggtg
gaagaattcgacatgaacaacgactctctcaccaccgagtgttttgggggcaattacaag
gtaaagaaagatgattcgaatacgtccaacagccacctgcccgaggaacgacagcgctat
tggaacgcctacatgttgttctacgaatacacgggctcgcccagtacgaagagcggcaaa
atgccgaggaagaatagctctcaatcccaatcacgcttaagtgctcggaagaatgcccgg
aagacctcggaacccgccattcctccccgagaaagcttctctcaactgagtgatttggtg
gtgaaaggggaagagaaaggaatcttcctcaacaagatgccgcccccgattgaacgcgat
atccaagaggaaaatctaagattcttggaaaatcgagatgtgttctgccgtgaatactac
actttcatcacggagctgattcaagtgaacatgactcgaaaacctcagatgagtgatgac
gaatacgatcaattgggcacttactccctgcgtctcgggattcatttccttctcaacaca
tactttcatctgaagcgcaaagattcagctttgattggagagatcgtgaatgcttgccag
agtctctgtcggtctagtttgaaatgctgtgattggcttctctcctttctcattggcgag
ggtcaggtctatttgcgaccatttctcatcgaatgcccatccaaagaggtccgacacaat
tcggccaggattgtgctcatggccatggagttttacgaaaaacaccacgggtcggatcag
gacgagaaagtggcttctttgttggttcacgtggtctccattctaagccaggatgtgccc
aatcatggcaagcattcaggacaattcttctggctactttcacaatatgcaagattggga
cccaaacactgtcaaaagctcttcaacttgaacgccttctctcacgtgttcaagttcctt
ctgggttgcgagcccgaaccagagaatcccgaggatcttctcaaccaacgccgtcgttgg
actggtttgcaaattagagacttcggcgaggttcatctcgtcttggcccatatgattcta
tcctgcgatctgaccaaacatagagatatcatagacgattccaagcccccggacagtgtt
gctagtaacgttgcaagagcgcatggcgatagctctgaagggcgtaacccaatgccctcc
actctaaccaacgttctctttggagccattgccccgttgtttattcgcgaatgcatctgc
gccatcaaagaagacaacacggaaggagttggtcccataatggaaatgcttgttcaagtg
gcctttaaggactcaaagttctcggagaacctaatctcggagcttctcaagcaatacagc
aatgctaatccgggagaattaaagaacctctcctcattgctttgcgacatactggtccta
caagattccttccaaggcgatagagtgaaatatgtgatagaggggaaagagagctcctct
gtagagggtcttctcaccctcgtgacgaataatcagtcttccgaaagccgaacgtatcaa
tgcatcaagaccttagtggttgcctcgaatcggagctctgccgtcaaggattacctactc
caagactcgaagcgatgggaatgggctgtgaattggttgaaatccaaaatgtcggacgat
ttcaattggaattccaacgaggacgtcgtctcgaatgaggactcgaatatccggacattc
catcgcaccacgtccgctcaagtgactttagatgaggccaatgccattttggccgaattc
gggggaaccaagagccccaaagagttgctcgtcccgtcgtgctcgaggtcgattagtaca
accaaaaagactgctgcttcactttcgaccggtactcaatcccattgtgaaggaatggag
accgatcaaaaatgtgaagatgaagagatgccagagcacagttga
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integrated database retrieval system
