Tigriopus californicus (tidepool copepod): 131886780
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Entry
131886780 CDS
T09700
Name
(RefSeq) trans-acting T-cell-specific transcription factor GATA-3-like isoform X1
KO
K17894
GATA-binding protein 2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131886780
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
131886780
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GFIT
Motif
Pfam:
GATA
DUF7573
Zn_Ribbon_TF
zf-RRPl_C4
eIF-5_eIF-2B
Vps36-NZF-N
ArfGap
Motif
Other DBs
NCBI-GeneID:
131886780
NCBI-ProteinID:
XP_059091165
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Position
9:3401037..3404689
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AA seq
553 aa
AA seq
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MVVMEDPGALAGGTPSATPVHHRESTSAPSDPSGSAHLNNGANSVAHGSRWYDINTNGPD
SHAAMEHQQYYPQKSPSNNVNNTSNNTNSPLYYQSPGGGDYGRATDSRSPGPASLPSIMS
STSSPSLIPSTVASFYSPITSMWGSTFASSTPSGSTSTNHKSYPISLPSNSNFAYPPTPP
IDMKLEASAASVAALAAGGGAHSNGVDTYHPALHDDFHGLSIPGVSNLQGPKHSQDHLMS
SLGFSSYPVISGGKKFQEGMNSPLSHSNATGDLSGLSSVMSGLPLESSHQSGGGTSNGHH
PSASYVYPYIPTSHGTSDLTSPFYGSYSAKTLQPSRPRSKIRANAEGRECVNCGATSTPL
WRRDGNGHYLCNACGLYYKMNGQNRPLIKPKRRLSSARREGTICANCKTTNTTLWRRNQN
SEPVCNACGLYYKLHNVPRPLTMKKDGIQTRNRKLSAKSKKKRGTVDDFFKPNQFSAYGS
SSYFSSPMSQYYGMGQMSAAAQFSSPMAAAAGMYSTGSAAAAAAGLAASFQPSVSGQSIF
GSSGATSAAAFAL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggttgttatggaggacccaggtgccttggcgggaggcacaccctctgccaccccagtg
caccatagggaatcaacgtcggccccaagtgatccctcgggaagtgctcatttgaataat
ggagccaattccgtggctcatgggagccgttggtatgacatcaataccaatggtcccgac
tctcatgccgcaatggagcatcaacaatattacccacaaaagagcccgtcaaacaacgtg
aacaacacttcaaataacaccaatagtccattatattatcaatccccgggtggtggagat
tatggtcgggccactgattcaagatcaccgggtccggcatcgctgccctccatcatgtca
tccacttcttcaccctcacttatcccatcgacagtggcatcattctactccccgattacc
tcaatgtggggatccacttttgcgtcctccacgccatctggctcaactagtacaaatcac
aaatcatatcccatctccctcccttcaaactcaaattttgcctatccgcccacgcccccc
atcgatatgaaattagaagcctcggcagcctcagttgccgctttggcggccggaggtggg
gcgcattccaatggagtagacacctatcatcctgctctccatgatgatttccatggccta
tcgattcctggcgtgagcaatcttcaaggtcctaagcattcccaagaccatttaatgagc
tccttggggttttcgtcatatccagtcatctccggtgggaagaagttccaagaaggtatg
aactccccgttgtcccattcgaatgcgaccggtgacttgtccggtcttagtagtgtcatg
tctggccttcctcttgagtcctcccatcaatcaggaggcgggacaagtaatgggcaccac
ccatcagcatcatatgtttacccttacataccaacatcacatgggacgagtgatctcacc
tcgccattttacggctcatactcggccaagacattgcagccttcaagacccaggtcaaaa
attagagcaaatgcggagggccgagaatgtgtgaattgcggtgccacgtccacgccccta
tggaggcgtgacggaaacggtcattacttgtgcaatgcctgtggtctttattataaaatg
aacggccagaaccgtcctctaatcaagccaaagcgacgattgtcatctgcgcgtcgggaa
gggacgatatgcgctaattgcaagacaacaaacacaaccctctggaggcggaatcagaat
agcgaaccagtttgcaatgcctgtggcctttactataagcttcacaacgttcctcggcct
ctgacgatgaagaaggacgggatccaaactcggaatcggaaactctcggccaagtccaaa
aagaaacgcggcaccgtggatgacttctttaagcccaaccagttctcggcttacgggtcg
tcatcctacttctctagtcccatgtcgcaatattatggcatgggtcagatgagtgccgcc
gctcagttctcctcgcccatggctgcagccgcaggaatgtattccacgggctcggccgcc
gcagcagccgcaggcctggcggcctcttttcaaccttcagtgagtggtcagtcgatattc
ggatcatctggcgcaacctccgcagctgcatttgccctctga
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