Tigriopus californicus (tidepool copepod): 131886801
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Entry
131886801 CDS
T09700
Name
(RefSeq) signal transducer and activator of transcription 5B-like isoform X1
KO
K11224
signal transducer and activator of transcription 5B
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
131886801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131886801
Transcription factors [BR:
tcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
131886801
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
STAT_bind
STAT_linker
STAT_alpha
STAT_int
SH2
Motif
Other DBs
NCBI-GeneID:
131886801
NCBI-ProteinID:
XP_059091192
LinkDB
All DBs
Position
1:complement(1900393..1926758)
Genome browser
AA seq
933 aa
AA seq
DB search
MKMSDLTGIPNAPNQCLYNDPSVYVKTEYDQDSPNPSSSMSSGGAVAMSPSDVPANAALL
HGGLSTGLHVGGSGGPLNALLWAKSQHLPLEITRQLQGIYGDHFPVEARHALAGWIETTA
FNEELDTSNPQYEEHARIMVQTMVQQLQIKAAECLDYHHKQKLEHIVEHFKTRYAHNPLD
LYHIVQHCLRQEMDIIQKADLMNQDCSSPPGVSQSTSEAAYRIQQQLVALKKSTDECSAE
TNKTAHIQETHSLNYYKHHQMTVQLESGQHNEASHEYSKFQEWKDRFAEDLRQSFNTLKV
KISTLMNSHLEMTKQLKDLQYRILELELSKWKRDQQLSGNGAPFANNIDQIQNWCEECAE
IIWLNRSHVRRLEIIQESLNMPSHEVPMVLLPELSEGYTQLLDTLVKSSFVIEKQPPQVL
KTNTRFSATVRLLVGTKLKVHINPPTVSVSIISEAQANSLLRMGPNPKSRSQFSSGEILN
NKQTMEYHQATGQLSVSFRNMSLRKIKRAEKKGTESVMDEKFSLLFWSEFTIGNNEFSCN
YQVLAPSLPVVVIVHGNQEPHAWATILWDNAFAEWGRQPFLVPDKVPWGQLANTLNMKFK
ASCGRGLSEDNLRFLASKAFRSQGYHHDFSNAMMSWSQFCKEPLPDRSFTFWDWFHAVMK
LTKEDLRGLWIDGALLGFISRQEAEEYLHKSENGTFIIRFSDSELGGVTVAWITVDDKTG
QREVAMLMPYTRKDLLIRSLPDRISDSVQMLYLYPNIPKDVAFGKYYNNQHESMPQRNPR
NGYVPHHLVNVIQGPFFNNPITDSVPPPSTPRTPLPSHQHSISSNFCETPQSPLSSSSTA
MVSNSTNRSHPVPGGIPGKSRNPVLQPQHSSSSTDSGTAIKLEDGPFGPRGDHCQSRHSI
ILAKHHQQMQQQQQQQQHIPCDSQAHHVESTTT
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgagcgatttgactggaatcccaaatgcgcccaaccagtgtctctacaacgat
ccctccgtctatgtcaagactgaatatgatcaagactctcccaatcccagttcatccatg
tcttcgggtggagctgtggccatgtctccttcggacgttcctgccaacgcagctctatta
cacggaggtctgagcactgggttgcacgtgggcgggagtggtgggcctttgaatgccctt
ttatgggccaagagccaacaccttcctttggaaatcacccgacaactccaaggaatatat
ggtgaccattttcccgttgaggcccggcatgccttggccggctggatcgagacaacggcc
ttcaacgaggaattggacacatccaatccccaatatgaggaacatgccaggatcatggtc
caaaccatggtccaacaacttcaaatcaaagccgcggagtgtctggattatcatcacaaa
cagaaattggaacacattgtggaacatttcaagacacgttacgctcataatcccttggac
ctttatcatattgttcagcattgtttgcgccaagaaatggacatcattcaaaaagcagat
ctgatgaaccaagactgttcctcgccgccaggtgttagtcaaagcacatcagaggctgct
taccggatccaacagcaattggtcgcccttaaaaagagtacggatgaatgctcggccgaa
acgaacaagaccgctcacatccaggagacgcattccttgaactattataaacatcatcaa
atgacagttcaattggagagcggtcaacacaacgaagccagtcatgaatattccaagttc
caagagtggaaagatcgatttgcagaggacctacgacagagttttaatactctgaaagtc
aagatctcaaccctgatgaacagtcacctggaaatgacgaaacagctgaaggatctccag
tatcggatcctggagctggaactgagcaagtggaaaagggaccaacagttatcggggaat
ggcgccccatttgccaacaacatcgaccagatccaaaattggtgcgaggagtgcgccgag
atcatctggctcaatcgaagtcacgtccgaagattagaaataatccaggagagtctcaac
atgcccagccatgaggtccccatggtcctgttgcctgagctcagcgagggatatacccaa
ctcttagatacattagttaaaagctctttcgtgatagaaaagcagcctccacaggtgttg
aaaacaaatactcggttttccgccacagtccgcttacttgttggtaccaaattaaaggtc
cacatcaatcccccgactgttagtgtcagcatcatcagtgaagcacaggccaattcttta
ctaagaatgggccctaacccgaagtctcggtcccagttctcctctggtgagattctcaac
aacaagcaaacaatggaataccatcaagccactggtcagttatcggtcagctttcgaaac
atgagtctgcgaaagatcaaacgtgccgagaagaaaggcacggaatccgtcatggatgag
aaattttctcttctcttctggtctgaattcaccataggcaacaatgagttctcttgcaac
tatcaggtcctggctccgtccttacctgtggtggtaattgttcatggaaaccaggagccg
catgcgtgggctacgattttgtgggacaacgcctttgctgaatggggtcggcagcccttc
ttggtgccggataaggttccttggggtcaactggccaatactttaaacatgaagttcaag
gcctcctgtggtcgaggcttaagcgaagacaaccttcgctttctcgccagtaaagcgttt
cgcagtcagggttaccatcacgacttttccaatgccatgatgagctggtcgcaattctgc
aaggaacccctgccagatcggagcttcacgttttgggattggttccatgcagtcatgaaa
ctcaccaaagaggacttgagaggtctttggattgacggggcgctattgggatttatatcc
cgtcaggaggctgaggaatacctccacaaaagtgaaaatggtacctttattattcgcttc
tcggattcggaactcggtggagtgacggttgcttggatcacagtggacgataaaactgga
caacgcgaagtagccatgttgatgccgtatacccggaaagacctccttattcgctcctta
cctgaccgaatatccgatagtgtccaaatgctttatctctacccaaatatacccaaagat
gtggcctttggcaagtactacaacaatcagcatgagtccatgccccaaagaaatcctagg
aatggttatgttcctcaccatctggtcaacgtcatccaaggaccattcttcaacaatccg
attacggatagtgtgcctcctccgagcacacccagaacccctcttccatcccaccaacac
tcgatatcttcgaatttttgtgaaaccccacaatctccactttcgtcttcatctacagca
atggtcagcaacagcacaaaccgcagtcaccctgttcccggaggaattccaggtaaatcc
aggaaccctgtgcttcaaccgcaacacagttcttcaagtacagattctggcaccgccatc
aaactcgaggatggacccttcggaccacgtggagaccattgccagtctcgacattccata
attctggccaaacatcaccaacaaatgcaacaacaacagcaacaacaacaacacattcct
tgcgattcacaggcacaccatgtggagagtacgaccacatag
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