Tigriopus californicus (tidepool copepod): 131886806
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Entry
131886806 CDS
T09700
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
131886806
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131886806
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
131886806
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GFIT
Motif
Pfam:
SNF
Transposase_21
Motif
Other DBs
NCBI-GeneID:
131886806
NCBI-ProteinID:
XP_059091194
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Position
9:12568500..12570647
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AA seq
636 aa
AA seq
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MEEVKNQNRQSSEDEDDRGKWDNQCDFFLSCMGYAVGLGNVWRFPYLCYKHGGGTFLVAY
GVMLTLIGLPLFFLELGIGQYSGLGPTRIFGKLAPAFKGLGYGMLFVTLLVAIYYNMIIG
WTLYYMFAGFTSTLPWTYCGQPYNAISCYQSEQAEDCNSGGDGLTSYWNNTCTDVSEICQ
YYNLTHLEDEMDEFNFTMCSNGSTGIPLLKVYNRTTASEDYYSRIVLGLSDDTTWSNYGG
IKWDLALCLLAAWVIVGLSLIKGVQSSGKVVYFTALFPYFVLLCLLVRGAMLPGAVQGIN
FYLQPKLESLLDIHVWSDAATQIFYSLGPAFGGLITLASYNKFNNNCHRDAILIAICNFA
TSIFAGFVVFSIIGFMAHESGQAVSDVIASGPGLAFVAYPEAVTKFSCPPVWSFLFFLML
LSLGLDTQFTMTETLTTAVMDQWPELRKRKAWVVIGSALTGFILGLPMCCNGGVYMFTLI
DTFSASWSLLLLAFFEVVLVIYVYGFHEFMANVNEMGIWVPKILRYYWQINWYFFTPVLL
FLITIITWIMFEPCKYQGYVFPPAVQALGWLIATTSVMIAIGMGVFESLRLKKSGKITTY
KSLFRTTDKWGPAKHVPISEDECEVETGYDNPSYNK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtcaagaaccaaaatcggcaatcctcggaggatgaggatgaccgtgggaaa
tgggacaaccagtgcgatttcttcctatcttgcatgggttacgcagtaggattgggaaat
gtgtggcgatttccgtacttgtgctacaaacacgggggcggaacctttcttgtggcctat
ggagttatgttgaccttgatcggattgcctttgttcttcttggaactgggcatcgggcaa
tacagtggcctgggacccacccggatatttgggaaacttgcaccggccttcaaaggcttg
gggtacggaatgttattcgtaaccttgctcgtggccatctattacaatatgatcatcggg
tggaccttgtactacatgtttgccggcttcacctccactttgccgtggacatactgtgga
caaccttacaatgccatttcgtgctatcagtcagaacaagccgaggattgtaattctgga
ggcgatggtctcacttcctattggaacaacacttgtacggacgtgtcagagatctgccaa
tattataatttaacccacttggaggacgaaatggacgagttcaattttaccatgtgttcc
aacggatcaacaggaatcccattgttaaaggtttataatcgaaccacggccagtgaggac
tactactcaagaattgttctgggcctaagcgatgataccacgtggagcaattacggtggg
atcaaatgggatttggctctctgtcttctagcagcctgggtcattgtgggcttgagccta
attaagggcgtgcaatcatcgggaaaagtggtctacttcacagccctctttccttacttt
gtgctcctgtgccttcttgttcgtggcgccatgttaccgggggcggttcaaggtatcaat
ttctatctccaaccaaagttggagagcttgctcgacattcacgtttggtccgatgccgcc
actcaaattttctactccttgggaccagcttttggcggcctcatcaccttggccagttac
aacaagttcaacaacaattgtcacagggatgccattttgatagccatttgcaattttgcc
acatccatctttgccggatttgtcgtcttctccattattggattcatggctcatgaatca
ggacaagccgtgagtgatgtgattgcttcaggccctggtttggcgtttgttgcctatcca
gaagccgttacaaagttttcgtgcccgccagtatggtcctttttattttttctaatgctt
ttgagcctgggtcttgacacgcaattcaccatgaccgaaactctgaccacagccgtcatg
gaccaatggccggaattgcgcaagaggaaagcttgggtggtgattgggtccgccttgacc
gggttcatcctgggtttacctatgtgttgcaatggcggcgtttacatgtttaccctcatt
gacaccttctccgcctcgtggtcgctcctccttttggccttttttgaggttgttctggtc
atctatgtttatggcttccacgaattcatggccaatgtgaacgagatgggcatatgggtg
cctaagatcttgcgttactactggcaaatcaattggtacttttttacgccagtccttttg
ttcttgatcacgatcatcacgtggatcatgttcgagccttgcaaataccagggctacgtg
tttcccccagctgttcaagctttgggatggctcattgccaccacttcagttatgattgcc
attggaatgggcgtgtttgaaagcttaagactgaaaaaatcaggaaagattaccacctac
aagagcctgttccgaaccacggataaatggggacccgccaaacacgttcccatctcggag
gacgaatgtgaggttgagacaggctatgataatcctagttacaataaatag
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