Tigriopus californicus (tidepool copepod): 131886836
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Entry
131886836 CDS
T09700
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
131886836
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131886836
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
131886836
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Gene cluster
GFIT
Motif
Pfam:
SNF
Claudin_2
Motif
Other DBs
NCBI-GeneID:
131886836
NCBI-ProteinID:
XP_059091235
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Position
9:12579289..12582054
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AA seq
649 aa
AA seq
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MGKGEGAKESKDVKAAESGQNLAAGDDERGTWDNQCDFFLSCLGYAVGLGNVWRFPYLCY
EHGGGSFLVAYSLMLLLAGLPLFFMELSIGQYSGLGPTRIFGKLAPAFKGLGYGMLFVTM
LVAIYYNMIIAWTLYYTFAGFTSSLPWEFCGNDHNTLTCYQKDQADECNVAGDGFISFYN
NTCTPVSDICSSYNMTHVPDQFDQFNYTMCNNGTMDLPLNKVYPRRSASEDYFTRVMLGL
DETITWSNYGGLKWDLVLCLLGAWVIVCLCLIKGVQSSGKVVYFTALFPYFVLLCLLIRG
ALLPGAADGVVFYLQPHLHKLASVKIWSDAATQIFYSLGPSFGGLITLASYNKFSNNCHR
DAILIAFCNCATSVFAGFVIFSIIGFMAHESGQPISEVIASGPGLAFVAYPEAVTKFPLS
PAWSFLFFLMLLTLGLDSQFTMTETLTTALMDQWPQLRPMKGKVVIGASVVGFILGVPLC
CPGGIYMFTLIDSFSASWSLLVLALAEVILIIYVYGVHNFLNNIKEMGIRIPKFLELYWR
INWQVFTPVVLFFITIVTWITFKPCQYNGYVFPPLIQTLGWLMACTSIIIAVALSVYEVY
TRKNKGKITSNREMLQPTLNWGPAIKKIQPVQNTNNLSEATYNNEGFSS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggtgaaggagccaaagagtcaaaggatgtgaaggccgccgagagcggtcaa
aatctcgccgccggagatgacgagcgaggcacgtgggacaatcagtgcgatttcttcctc
tcgtgtttgggatatgcggtgggcttgggaaatgtctggcggtttccctatttatgctat
gaacatggaggtggatcgtttctcgtggcatactcgttgatgctgcttctggccgggttg
cccttgttctttatggaattgagcattggccagtatagtggtctgggacctacaagaata
tttggcaaattggctccggcctttaaaggtctgggctacgggatgttgttcgtaaccatg
ttggtggccatctactacaatatgatcattgcttggaccctttactacaccttcgccggg
ttcacgtcgtccttaccgtgggagttttgtggaaatgaccacaacacgttaacttgctac
caaaaggatcaagccgacgaatgcaatgtagctggggatggtttcatttcattctataac
aatacttgcacgcctgtatcggacatttgctcttcctacaacatgacccacgtgcctgac
cagtttgatcaattcaactacactatgtgcaataacggaaccatggacttgcccttaaac
aaagtataccctcgaagatctgccagtgaggattatttcacacgggttatgctgggcttg
gacgagaccataacgtggtcgaattatggtggtttgaagtgggatctcgtcctgtgtctc
ctcggggcttgggtgattgtttgcctttgtcttatcaagggtgtgcaatcctccggaaaa
gtcgtgtacttcaccgcccttttcccttactttgttctcttgtgcttgctcattcgagga
gctctgctaccaggagcagccgatggcgtggtcttctacctccagccgcacttacataaa
ttggccagcgttaagatttggtctgatgcggccacccagatcttctattcacttggaccc
tcctttggcggtcttattacacttgctagttacaacaagttcagcaacaattgccacagg
gatgccattttgattgccttctgtaactgcgccacatctgtttttgccggatttgtgatc
ttctccatcattggatttatggcacatgaatcgggtcaacccattagtgaggtcatcgcc
tcagggcctggtctggcttttgtggcctatcccgaggctgtgaccaagtttccattgtca
cctgcatggtctttccttttctttctcatgctgctgactttgggacttgactctcaattc
accatgacggaaaccctgaccacggctctgatggaccaatggcctcagcttcgacccatg
aagggtaaggtagtcataggcgcctccgtcgttgggttcattctaggtgttcctctatgt
tgtcccggaggcatctacatgttcaccctgatcgattccttttccgcatcctggtcgtta
ctggttttggctctagccgaagttattctaatcatctacgtctacggagtccacaatttc
ttgaacaatatcaaggagatgggcattaggattcctaagttcctcgagctgtattggaga
atcaattggcaggtgttcacacctgtggtgcttttcttcatcaccatcgtcacatggatc
acatttaagccttgccaatataatggctacgtgttccctccgctgattcaaactttaggc
tggttaatggcatgtacatccattatcatagccgtggctttaagtgtttacgaagtctac
acccgaaaaaacaaggggaaaatcacaagtaatcgggaaatgcttcaaccaactctcaat
tggggtcccgccattaaaaagatccaacctgttcagaataccaacaacctgagtgaagct
acctacaacaacgagggattctcatcctga
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