Tigriopus californicus (tidepool copepod): 131886879
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Entry
131886879 CDS
T09700
Name
(RefSeq) autophagy protein 12-like
KO
K08336
ubiquitin-like protein ATG12
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04068
FoxO signaling pathway
tcf04136
Autophagy - other
tcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
131886879
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131886879
04136 Autophagy - other
131886879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131886879
04121 Ubiquitin system [BR:
tcf04121
]
131886879
03029 Mitochondrial biogenesis [BR:
tcf03029
]
131886879
Membrane trafficking [BR:
tcf04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
131886879
Ubiquitin system [BR:
tcf04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
131886879
Mitochondrial biogenesis [BR:
tcf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
131886879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG12
ATG8
Motif
Other DBs
NCBI-GeneID:
131886879
NCBI-ProteinID:
XP_059091304
LinkDB
All DBs
Position
9:9233907..9234922
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AA seq
100 aa
AA seq
DB search
MASAEEQSSTIDAKVMVRLQPAGDAPIMQQRNYKVDGDKKIEWILAFVRKALKLDETEHL
FLYVNQAFSPSPDQTVRHLYDCFGGEGKLVLNYAKTPMWG
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgccgaggaacaaagttccaccatagacgccaaagtcatggtccggctacaa
cccgcgggcgatgcccccatcatgcaacagaggaactacaaagtggacggggacaagaag
atcgaatggatcttggcttttgtccggaaagccttgaaattggacgaaactgagcatttg
ttcttgtacgtgaaccaagcattttccccgtcgccagatcagaccgtgagacacttgtac
gattgctttggtggcgagggcaagctcgtgctcaattacgccaaaacgcccatgtgggga
tga
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