Tigriopus californicus (tidepool copepod): 131887004
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Entry
131887004 CDS
T09700
Name
(RefSeq) peroxisomal ATPase PEX6-like
KO
K13339
peroxin-6
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131887004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131887004
Membrane trafficking [BR:
tcf04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
131887004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
RuvB_N
AAA_16
AAA_lid_3
AAA_5
AAA_25
AAA_22
nSTAND3
Mg_chelatase
AAA_14
NPHP3_N
Parvo_NS1
RNA_helicase
AAA_18
DUF815
AAA_2
TIP49
AAA_24
AAA_17
AAA_19
TsaE
AAA_7
AAA_28
Motif
Other DBs
NCBI-GeneID:
131887004
NCBI-ProteinID:
XP_059091467
LinkDB
All DBs
Position
9:complement(9994070..9997127)
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AA seq
921 aa
AA seq
DB search
MNQSTFIPLSVIPHPSGWRDLTPRSNLEAFVNPTLALESWPPPPLFVEVRRNEASRSVFV
FSLKFCQDIPVGQICFPLRSWISDTCLVRLKTLEYSDPSRLAKVSIRSDVPAIEKLQNFL
TSTCPVFVSEGSCLKLVGNDISENAELVITSTQPFKTGLICQSTVVEMTKCSYLPKFWPL
VKYSIGLISRSHVIQNSLSQQLRSLCRNILVHQVQLINLDHARWLLQESGLARKLCLSTT
VFAHTWSEERVELVTINSMKVWRVHTSLVHFKYAPKVLVTSETLSNLGIEENENLLIEPS
LDSLVPNVERLSISFLNNSSYTKCSTRELDEILKKVFQQPKLLFQKSVNSIFVQDFLSLE
TQRFSWVLPPNARLVFKVVTMQCEDRFGLVSQDNTALSQKRTIVQVLPSESLIMTTSTPR
NSIPSLPRPLMQLQKEILQRIKGSLLIQGHHSQGLDLLFRSLSSHLGHSLRVEDCANFLG
DNSANTEIKLINALAKASELRPFLLILNNIHALAKNREGHLDYRVINRLQREISRQNRDP
HTVVIALAPINEPLDPLLHAVFGHVMPVPDLDSTQDISKVLRWLIEYVGIDLTSEVDVKG
LAQKCVGFSFTDLQETLERAQKQAQPAKVSHDVLDGCIRQIQDLASDSIGTPRIPQVRWS
DIGGLEKAKNEIRDTIDLPLEHPELVENGLKRSGVLLYGPPGTGKTMLAKVVASECNLNF
LSVKGPELINPYVGQSEQNIRDIFTQAKKASPSIIFFDELDSLAPNRGNTGDSGGVMDRI
VSQLLTQLDDMSNDLVFVIGATNRPDMIDPALLRPGRFDRLIHLGAAQTLEERRSIFQSV
TQKIQLESGLRLEDILTLFPEHLTGADITAIVSSASYKAIGRLISDIETQSQDDVGIEPE
VLLTFSDFESVAKEFVPSIPE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatccacatttattccactttccgtgattccccatccctcaggctggcgggac
ctcactcctcgctctaacctcgaggcttttgtgaatcccacccttgcccttgaaagctgg
ccacctccgccgctttttgtcgaggtgcggcggaatgaagcgtcgagaagtgtattcgtg
ttcagtttgaagttctgtcaagacattccagtgggccagatctgcttcccacttcgctct
tggatctcggatacgtgcttagttcgattgaaaacccttgaatactcggatccaagtcgc
ttggcgaaagtgtccattcgtagtgacgtaccagctatcgaaaaactccaaaacttcctc
acctcgacttgtcctgtcttcgttagcgagggctcttgtctaaagctggtcggcaatgat
atatctgaaaatgctgaactcgttatcacctcgactcaaccgttcaaaaccggattgatc
tgccaatccacggttgtcgagatgaccaagtgttcgtatttgcccaaattttggcccttg
gtgaaatattccattggtctgatttcacgaagccatgtgattcaaaactcattgagtcaa
cagttacgatcattgtgcagaaatattttggtccaccaagtccaattaattaacctcgat
catgctcgctggctgttacaagaaagtgggctggctcgaaaactctgtctttccacgacg
gtcttcgctcatacttggagcgaggaacgcgtcgaattggtcacgatcaattcaatgaaa
gtgtggcgagtgcacacaagtttggttcatttcaagtacgccccaaaagtccttgttacc
tccgagaccttgtctaatctgggtatcgaggaaaatgagaacctcctaatcgaaccttcg
ttggattccttggttccaaatgtggagagattgtctatatcctttctcaataactcttca
tatacaaagtgctctacccgtgaattagacgaaatcctgaagaaggtcttccagcagcca
aagttattgttccaaaagagcgtgaattccatatttgtgcaagacttcttaagcttggaa
acgcaaaggttttcttgggttctaccgccaaatgcacgcctagtgttcaaggttgtgaca
atgcaatgtgaggaccgatttgggctggtgagtcaagacaatacggccttaagtcaaaaa
cgaaccatagtccaagtgttgccatctgaaagcctgattatgacgacttctactccacga
aactccattccaagcctgccaaggcctttaatgcaattacaaaaggaaatccttcaacga
atcaaaggcagtttgttgattcaagggcaccatagtcaagggttggaccttctgttcagg
tctttgagctcccatttgggccattctttgcgggttgaagattgtgccaacttcctcggg
gataacagtgccaacactgaaatcaaattgatcaatgccctagccaaggcatcggaactg
cgtcctttcctcctaatcttgaacaatattcacgctttagccaagaatcgggaaggccat
ctggattaccgagtcatcaaccgcctccaacgcgaaatcagtcgccagaaccgcgatcct
cacacagtcgttattgctttagctccgatcaatgaaccattagaccctttattgcatgcg
gttttcggtcacgtcatgccagttccagatttggattcaacccaagacatctccaaagtt
ctccgttggttgattgaatatgtgggaatcgatttgacatcggaggtggatgtgaaaggt
ttagctcagaaatgtgtagggttctcgttcacggatctgcaagagactctggaaagagcc
cagaaacaagctcaacctgccaaagtgagtcatgatgtcctggacggatgtatccgtcaa
attcaagacttggcctcagattctattggaacaccgagaataccgcaagttcgatggagt
gatattgggggactggaaaaagccaaaaatgaaattcgagatactattgaccttcccttg
gagcatcccgaactcgttgagaatggccttaaacggagcggtgtccttttatatggacca
ccaggaacgggcaaaacaatgctagccaaagtggttgcgtcagaatgtaacttgaacttc
ctcagtgtcaaaggacccgaattgatcaatccttatgtgggtcagtcggaacaaaacatt
cgcgatatttttacccaagccaagaaagcaagtccttccataattttctttgatgaactg
gattcgttggcacctaatcgcgggaacactggagattcgggcggagtcatggaccggatt
gtgtctcaacttcttacccaattggatgatatgtccaacgatttagtatttgttattggt
gccacgaatcgacccgatatgattgatccggcattgctccgtccaggtcgatttgatcgg
ctcattcatttgggagccgctcaaaccctagaggaacgtcgtagtattttccagtcggtt
acccagaagatccaattggaatccggtttgagattggaagacatattaactcttttccct
gaacatctcaccggtgccgatatcactgccatcgtctcatccgccagttacaaagcaatt
ggacgcctaatctctgatattgaaacccaaagccaagacgacgttggcattgaacccgag
gtgctcttgacattttcagattttgaatccgtggccaaagaatttgttccatcgatcccc
gaataa
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