Tigriopus californicus (tidepool copepod): 131887005
Help
Entry
131887005 CDS
T09700
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
131887005
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
131887005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDPD
C2_GDE1
CBM_20
Motif
Other DBs
NCBI-GeneID:
131887005
NCBI-ProteinID:
XP_059091468
LinkDB
All DBs
Position
9:10001507..10008027
Genome browser
AA seq
711 aa
AA seq
DB search
METRLWKFSVHCQTLPGDVVCLTGSCPQLGLWKADKVVTMTRQSSSDNDTDSDKPDVWSV
EVAIPLGSDVYFRYCVCICVDYEHEQRVVIKNWETRLKARKIGCHDIPDQDSIHEFGFIN
TQESLTQCGWLTNETLVELKLYEKPVQIWKKKHQNKNLFVKITPVDVREAGQPSFCSDMD
ESIDIAETRFKGKAWPVINAASLDGDDCRFHPQNQFGIEVKENGFVSFQAQMFDMHTVAF
LVDIFARSDPEKELRDTLPAEHLGSCYVLPNHFKSTEGRVEQPIVSKGFQPIGQFSATYL
IIKPLKDAPCDFAISYAQHWKSNWKRLDVGHRGLGNSYSETQYCSNICENTIASLKDSVA
HGADMVEFDVQLSKDLVPVIYHNFELCTVISTKKGGQEVSVTMPVKNLTLEQLQQLKTHH
VEELKGGRKNFSEDHEDHEPFPSLERALKEINPHAGFNVEIKWDMEFPDGSRECHNPFEM
NLFIDVVLRKVLECGDERKIVFSSFNPDVCTTIRCKQNKYPVLFLTQGVNSKYANYRDPR
TWNIPNASKFVEMAEILGINAMAEDLLRDPGQVETVKKRRQVLFCWTDDKNDKDTLNCLK
KMDLDGIVYDRMDMNNSKLVKESIFMMDKRFESNEDEDFPVHIHQQTSPTHSSCSCTSGA
KENALPSPSSLIVSEFTPASSAEEITPKVDMEEDGENCKSAFISKASALCI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgattgtggaagttctccgtccattgtcagactctaccaggagatgtggtt
tgtctcactgggtcctgtccacaattaggcttgtggaaagccgacaaggttgtgaccatg
actagacaaagctcatccgataatgacaccgatagtgataagccggatgtttggtcggtg
gaagtagccattccgctcggatcagacgtctatttcagatattgcgtgtgtatttgcgtg
gattatgagcatgagcaaagagttgtgataaagaactgggaaacccgcctcaaggccagg
aaaattggatgccatgacataccagatcaagacagtattcacgaatttggattcatcaat
acccaagaatctctaactcaatgcggttggctcaccaacgagactctcgtggagttgaaa
ttgtacgaaaaaccggtacaaatatggaaaaagaagcaccagaacaagaatctgtttgtg
aaaattactccagtggacgtgagagaagcaggacaaccatccttttgttctgatatggac
gagagtattgatattgccgaaactagattcaaaggcaaagcatggcctgtgatcaatgct
gcgagtttggacggtgacgattgtcgttttcaccctcaaaatcagtttggaattgaagtc
aaagaaaatggatttgtgtccttccaagcacaaatgtttgacatgcacacagtcgcgttc
cttgtggatatctttgcccgatcggatcccgaaaaagagctgagagatactctgccagct
gaacacttgggctcatgctacgtcttgcccaatcatttcaagtccaccgaaggccgagtt
gagcaacccatagtttccaaagggtttcagcccattggccaattctcggccacatatctg
attatcaagcccttgaaggacgctccgtgtgattttgccatttcctacgcccaacattgg
aaatcgaattggaagcgcttggacgtcggacacagaggattgggcaattcctattctgaa
acacagtattgctcaaacatctgcgagaacacaatcgcctcgctgaaggactccgtggct
catggagctgatatggtggagttcgatgtgcaattgtcgaaggatttggttcctgtgatt
tatcacaattttgagctctgtactgtaatctccacaaagaaaggaggccaagaagtttcg
gtgacgatgcccgtgaagaatctgaccttggaacaactccagcagttgaagacccatcat
gtggaagagctgaaaggtgggcggaagaatttctcagaggatcacgaggatcatgagccc
tttccaagcttggagcgggctctgaaggagattaatcctcacgccggattcaacgtggag
atcaaatgggatatggaatttccggatggctctcgcgagtgccacaatccatttgaaatg
aatcttttcattgatgtcgtgttgcggaaggtgcttgaatgtggtgatgagcgcaagatt
gtgttctcctccttcaatccagatgtctgtaccacgatccggtgcaagcaaaataagtat
ccagtattattcctcacccagggagtgaatagcaagtacgccaactaccgcgatccaagg
acgtggaatatcccaaatgcctcaaagtttgtggaaatggccgagattcttgggatcaac
gctatggctgaagatttgctgagagatcctggacaagtagaaacagtaaaaaagaggaga
caagtcctcttttgttggactgatgataagaacgacaaggatacattgaattgtctcaaa
aaaatggacttagatggcatcgtctacgacaggatggatatgaataattcgaaattggtg
aaagaaagtattttcatgatggacaagcgctttgaaagtaacgaggatgaagactttccc
gtacatatccaccaacaaacgtctcccacacattcatcttgctcctgtacttcaggtgct
aaagaaaacgccttgcctagtcccagttctctaattgtatctgaattcactcctgcgtca
tctgcggaagaaattacacccaaagtggatatggaagaggatggggaaaattgcaagagt
gccttcatctccaaagcttccgcgctctgcatttga
DBGET
integrated database retrieval system
