Tigriopus californicus (tidepool copepod): 131887022
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Entry
131887022 CDS
T09700
Name
(RefSeq) transcription elongation factor SPT4-A-like
KO
K15171
transcription elongation factor SPT4
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131887022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131887022
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131887022
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
131887022
RNA polymerase I system
131887022
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
131887022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
131887022
NCBI-ProteinID:
XP_059091490
LinkDB
All DBs
Position
9:complement(14273981..14275309)
Genome browser
AA seq
115 aa
AA seq
DB search
MTDAIPKDLRQIRACLSCSLIKTFEQFESDGCDNCDTFLGLRHNRDNIYDCTSTNFEGMV
GMCKPEDSWVGKWQRINRFKTGVYAISVSGRLPQAVVRDMRASNINHRSRDTSKR
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccatccccaaagatctccggcaaatccgggcctgcttatcgtgctcactc
atcaagaccttcgagcaattcgaaagcgatggttgtgataattgcgacacgttcttgggc
ttgcggcacaaccgtgataacatctacgactgtaccagcaccaactttgagggcatggtg
ggcatgtgcaagcccgaagattcctgggtgggcaaatggcagcgcatcaaccgattcaag
acgggtgtgtatgccatttccgtgtcaggacgactgccccaagccgtggttcgggatatg
cgggccagtaatatcaaccaccggagtcgggataccagtaaacgataa
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