Tigriopus californicus (tidepool copepod): 131887289
Help
Entry
131887289 CDS
T09700
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00061
Fatty acid biosynthesis
tcf00071
Fatty acid degradation
tcf01100
Metabolic pathways
tcf01212
Fatty acid metabolism
tcf04146
Peroxisome
Module
tcf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131887289
00071 Fatty acid degradation
131887289
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131887289
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tcf01004
]
131887289
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131887289
Enzymes [BR:
tcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
131887289
Lipid biosynthesis proteins [BR:
tcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131887289
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of breast milk
131887289
Exosomal proteins of breast cancer cells
131887289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
TTR_TEN1-4
Motif
Other DBs
NCBI-GeneID:
131887289
NCBI-ProteinID:
XP_059091843
LinkDB
All DBs
Position
9:12424671..12427382
Genome browser
AA seq
742 aa
AA seq
DB search
MILATVLMIFVRVLVGIYTFLSYPIYALIYHPCWGRSRRHSPNEAKARIVSRTGNEVTFR
AIPYPSPVRDAILSHPDNINTMEELFRFMVKRYGNRRALGTRTVIKEDTEKGPNGKIFNK
LVLGEYQWLKYTDLDVRADQFGRGIRELGVHPRERICIFADTRAEWMTSALGCFKNSIGL
VTIYTNLGDEGIVHGISQTEVTTAITSLDLLPKLIHVLPDVPKLKNIIFFENKLKPEPEP
VKDVNLYSYSDVLALGQKSSIAAASPNSSDTAIIMYTSGSTGVPKGVVLTHGNMVSGALS
ILPLADAALAKIGRPVNEEDAYIAFLPLAHVLEMLAETVMLLLGVKLGYSTPNTLTDKGT
MIKSGAKGDATLLRPTVMCAVPLILDRIYKGIKLNISQRSEFSQKLVNFCIEYRKYWVEH
GYDTPIMNKLIFSKMQSIVGGRLKILLSGGAPLSEDAHAFIQTCLGCSLHQGYGLTETCS
TACITAPGDVRTGIVGPPLMGVDLKIVDAPELGYTVRDTNGPRGEIVIGGHHVAKEYYNM
PEKTAEEFYQEDGKQFFKTGDIGWALPDGSVKIIDRMKDLVKLQGGEYVSLGKVESSLKT
HTLIDNICAYGDSHENAMVALIVPDEAKLLELGKELGKEAKDVEGLCRDPQVVKHVTESV
IQYSQKAKLQKFEIPRQVHLIPEPWTPESGLVTAAFKLKRKPIQQKYAQDIEDMYNLLEH
PNSVSLKIQSKKTSNKISPKSK
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgattctggccacggttcttatgatctttgtcagggtcctggtgggcatttacacgttc
ctgtcctaccccatctacgccctaatctaccatccttgttggggtcgaagccgccgtcac
tcgcccaatgaagccaaggctcgcatcgtatccaggaccgggaatgaggtcacttttcgg
gccatcccgtatcctagtccggttcgggacgcgattttatcccatccggataatataaac
actatggaggagctcttccggttcatggtcaagaggtacggcaatagacgagctttggga
acgaggacggtgatcaaggaagacacggagaagggtcccaatgggaagatcttcaacaaa
ctggttttgggtgaatatcagtggctcaagtacaccgatttggatgtccgcgctgatcag
tttggacgaggcatccgcgaattgggcgtgcatccccgggaaaggatttgcatatttgca
gacactcgggcggaatggatgacctcggccttgggctgcttcaagaatagcattggcctg
gtcaccatctataccaatctgggcgatgaaggcatcgtgcacgggattagtcagacggaa
gtgaccaccgccatcacatccctggaccttctaccgaagctcatccatgtcttgcctgat
gtccccaagttgaagaatatcatctttttcgaaaacaaactcaagcctgaacctgagcct
gtgaaagatgtaaatctgtactcttactcggatgtattggcattgggacaaaaatcctcg
attgccgcagcttcacctaatagctcggacacggccatcattatgtacacgagtggatcc
acgggtgtacccaaaggcgtggttctgacgcatggtaacatggtgagcggggctttgtcc
attctgcctctggctgatgcagccctggccaaaataggcaggcccgtgaatgaggaggat
gcctacattgcgttcctacctttggcccatgttctcgagatgttagccgagactgtgatg
ttacttctcggcgtcaaattgggctactcaacacccaacactctaactgacaagggcacc
atgatcaagtccggagccaagggggatgccactcttctccgaccgaccgtgatgtgtgcg
gtgccactgatactggaccgaatctataagggcatcaagctcaatatttcgcaacgaagc
gaattctcccaaaagctcgtcaacttctgcattgaataccgcaagtactgggtcgagcat
ggctacgacaccccgatcatgaacaagctcatcttctccaaaatgcaaagcatcgtggga
ggcaggttgaagattctcttgagcggaggtgcacccttatcagaggatgcccatgccttc
atccagacctgccttggatgctctcttcatcaaggctatggcttgaccgagacttgttca
accgcttgcataacagcgcccggtgatgttcgcactggaattgtaggtccacccctaatg
ggggtcgacctaaagatcgtggatgcccccgaattgggctacacggtcagagatactaat
ggcccgcggggagagattgtgatcggagggcatcacgtggccaaggagtattacaatatg
cccgagaaaacggccgaagagttctaccaagaagatgggaagcaattcttcaagacgggc
gatatcggttgggctcttccggacggaagtgtgaagatcattgatcgtatgaaagatctg
gtcaagctccaaggcggagaatacgtttcgttggggaaggtcgaatccagtctgaagacg
catactcttatcgacaacatttgcgcttatggcgactcgcacgagaatgctatggtggcc
ttaattgtgccagacgaggccaagctcttggaattgggcaaggaattgggaaaagaggcc
aaagatgtggagggattgtgtcgagatcctcaagttgtcaaacacgtgaccgagtctgtg
atccaatattctcagaaagccaagcttcaaaagttcgagattccacgtcaagttcatctc
attcctgagccttggactcctgaatctggattagtcaccgcagcattcaagctcaagcgc
aaacccatacagcaaaagtatgcgcaagacattgaagacatgtacaatcttctggagcat
cccaattccgtgtcactgaagatacagagcaagaaaacgagcaacaaaattagtcccaag
agtaaataa
DBGET
integrated database retrieval system
