Tigriopus californicus (tidepool copepod): 131887303
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Entry
131887303 CDS
T09700
Name
(RefSeq) protein argonaute-2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131887303
03036 Chromosome and associated proteins [BR:
tcf03036
]
131887303
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131887303
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131887303
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
131887303
microRNA pathway
RISC loading complex
131887303
BRITE hierarchy
Motif
Pfam:
Piwi
ArgoN
ArgoMid
PAZ
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
131887303
NCBI-ProteinID:
XP_059091860
LinkDB
All DBs
Position
9:complement(6282734..6287892)
Genome browser
AA seq
976 aa
AA seq
DB search
MFSVGGPPQSGPPGPVGPPGSNSSSNNGGSGLGGHPGVIGNPPITQTLGTGIGLGLGTMI
QGTGSLGAIGPSSSGGSSLGGGNGAGAPGDRSPPGVGGVTAALGGLTLGGGNVAAGGGNG
VYGGGPIGSLPGPNPDGPVFVCPRRPNLGRDGRPILLRANHFQITMPRGFISHYHVSIQP
DKCPRKVNRDIIETMVQSYSKIFGASKPVFDGRSHLYSREPLPIGKEPVDLEVTLPGEGK
DRVFRVSIKWVAQVSLYDLEEALEGRTRTIPFDAIQALDVVMRHLPSMTYTPVGRSFFSS
PEDYYHPLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIDFMCEVLDLREVV
DSKRPLTDSQRVKFTKEIKCLKIEITHCGAMRRKYRVCNVTRRPATMQSFPLQLENGQTV
ECTVAKYFLDKYKMKLRYPNLPCLQVGQEHKHTYLPLEVCNIVQGQRCIKKLTDMQTSTM
IKATARSAPDREKEINSLIRRADFNNDPFVQEFGLNISHSLMEVRGRVLPPPKIQYGGRS
KQQALPNQGVWDMRGKQFFTGVEIREWAIACFAPSRTVREDALRNFTVSLQKISNDAGMP
IVGQPCFCKYANGPDQVEPMFRYLKNTFHGLQLVVVVLPGKTPVYAEVKRVGDTVLGMAT
QCVQAKNVNKTSPQTLSNLCLKINVKLGGVNSILVPSIRPKVFNEPVIFLGADVTHPPAG
DNKKPSIAAVVGSQDAHPSRYAATVRVQAHRVEIIQELSTMVKEHLMMFYKSTGGYKPHR
VIIYRDGVSEGQFMQVLQHELTAIREACIKLEADYKPGITFIVVQKRHHTRLFCAEKKEQ
SGKSGNIPAGTTVDVGITHPTEFDFYLCSHQGIQGTSRPSHYHVLWDDNRFVADELQQLT
YQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVEKEHDSGEGSHLSGGSEDRAPAAMA
RAVTVHSDTKRVMYFA
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgttttccgtggggggaccgccgcaatccggccctccgggtcccgtgggacctcctggc
tccaacagcagtagcaataacggtggttccggcttaggcggccatcctggcgtgattggc
aacccacccattacgcagactttgggcacgggcattggattgggattgggcaccatgatc
caaggcacgggttctttgggcgccatcggcccttcctccagtggcggtagttcgttaggc
gggggcaatggagcgggtgcgccgggggatcgatcgccaccgggtgtcggcggtgtcact
gcggccctcggggggctaaccttgggcggtggcaacgtggccgccgggggtggaaatggc
gtctatggcggtggcccgattggttcgttacccggccccaatcctgatggacccgttttt
gtgtgtccccgccgtcccaatttgggtcgtgatggtcgccccattctcctccgagccaat
cacttccaaatcacaatgccgcgcggcttcatctcccactaccacgtgtccatccaaccc
gacaagtgcccccgcaaagtcaatcgcgacatcattgaaacgatggttcagtcgtatagc
aaaatcttcggcgccagtaaacccgtgtttgacggtcgctctcacctctactcccgtgag
cccttacccattggcaaagagcccgtggacttggaagtgactctgcccggcgaggggaag
gaccgtgtctttcgcgtgtctatcaaatgggtggcacaagtttctttgtacgatctcgag
gaggcgttggagggccgtacgcgcaccatcccgttcgatgccattcaggccttggacgtg
gtgatgcgacacctcccttccatgacttacaccccagtaggccgaagctttttttcttca
cccgaggattactatcaccctttgggtggtgggcgagaagtttggtttggtttccaccag
tcggtacgaccttcccaatggaaaatgatgctcaacattgatgtgtcggccacggccttc
tacaaggctcagcccgtgattgacttcatgtgcgaagtgttggatctcagggaggtggtc
gattccaagcgaccgctcaccgattcccagcgggttaagttcaccaaggaaatcaaatgc
ctcaagatcgaaattacccattgtggtgccatgagacgaaagtatcgagtatgcaacgtc
acgcgacgacccgccaccatgcaatcatttcccctccagcttgagaatggtcaaactgtg
gagtgtaccgtggccaaatacttcttggataaatacaagatgaaactcaggtaccccaac
ctgccctgcttgcaagtgggacaggagcacaaacacacttacctgcctctcgaggtctgt
aacattgttcaaggccaaagatgcattaagaagctcacagacatgcaaacgtccacgatg
atcaaggctactgcgcgatccgccccagaccgggaaaaagaaatcaacagtctcattcgc
cgtgctgacttcaacaacgatcccttcgtacaagagtttggtctcaacatcagccacagc
ctcatggaggttcgaggccgggtcttgcccccgccgaagattcagtacggtggtcgatcc
aagcaacaagccctccctaatcagggagtgtgggatatgcgtggcaagcaatttttcacc
ggagtcgaaattagggaatgggccatcgcctgctttgctccaagtcggaccgtacgcgag
gacgcactcagaaacttcacggttagtcttcaaaagatcagtaacgacgccggcatgccc
atcgtgggacaaccttgcttttgcaaatacgctaatggtccggaccaagtcgaacccatg
tttcgatatctgaagaacaccttccatggcctccaactcgtagtggttgtgttgcccggc
aaaacaccagtctatgctgaagtgaagcgtgtgggtgacactgtgttgggcatggccact
caatgcgtccaagccaagaacgtgaacaagacctctccccagaccttgtccaacttgtgt
ctcaaaatcaatgtgaaactggggggagtgaatagtattctcgttcccagcattagacca
aaggtattcaatgagcccgtaatcttccttggggcagatgtcactcaccctcctgcgggc
gacaacaagaaaccttccatagcagcagttgttggatctcaagatgctcacccctctcgg
tatgctgccaccgttcgggttcaggctcatcgtgtcgagatcattcaagagctttccacc
atggtcaaggagcatctcatgatgttctacaagtcaactggaggctataagcctcatcgt
gtcatcatttatcgcgatggcgtgagtgagggtcaattcatgcaagtgctccaacacgag
ctcacggccatccgtgaggcatgcatcaaattagaagccgattacaagcccgggataacg
tttattgtggtccagaaacgccatcacactcgtctgttctgcgccgagaagaaagagcaa
tccgggaaatccggcaatataccagctggaaccaccgtcgacgtaggcatcactcatccc
accgaattcgacttctacttgtgctcacatcaaggtattcaaggcaccagtcgaccctcc
cactaccatgttctatgggacgacaaccgatttgtggccgacgagctccagcaactcacc
taccaactctgtcacacctacgttcgttgtactcgatctgtgtcgattccagcccccgct
tactatgcccatcttgtggccttccgtgcccgttatcacttggtggagaaagagcatgat
tctggtgaaggatcgcatctctcgggtggatccgaagaccgagccccagccgccatggct
cgagccgtcacggtgcattccgacactaagcgagtcatgtactttgcctag
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