Tigriopus californicus (tidepool copepod): 131887314
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Entry
131887314 CDS
T09700
Name
(RefSeq) sorting nexin-13-like
KO
K17925
sorting nexin-13
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
131887314
Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
131887314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
L_protein_N
ParcG
DUF5087
Motif
Other DBs
NCBI-GeneID:
131887314
NCBI-ProteinID:
XP_059091877
LinkDB
All DBs
Position
9:complement(8821919..8827752)
Genome browser
AA seq
1050 aa
AA seq
DB search
MTLYAQSFLVINMERKWIFIALALGFVSMGTQGLVLVVLCSVLLVTGVLCTLFALSDTVQ
FRQRLLDSTQRYKQISPGSVAQPFKAEAQLATDPSLTGYGKLDEELDDILNYVFRDYVYS
WLFSISHSDEFVLQVRDTLHVVLTSLSERVRAVDWMPFLTTRLVDDVATHVRLFKRARTN
YRTKKDVADNGKITDLESLFFDAEVSMERDVCRDLVCTIHQEEITYLQDVSELLLFLLLP
QADFRAGPLRTVVRELLVNVILRPILDVVSDPDWINQNIVWLYKDSVIKPDLFSTTLRLT
ESVQELQATRDIVSDHINHLRSNDSKGEEDSSLKQQLNSLLNLRKSIDNRINRLQSGSDT
DSIGVPTHVDWRQMIAPGLTLFPLPIEVVLKNNIALSYFIDYMSSIGCQSYIFFYLNIEG
WRVSAEQQILQLDLEAFRRQSNAHAPERDGEEDTFVKVELNRKDILDKMREAAHSIYEEY
LSEKASPRLKVDDSVVKRLLFKIRTEPPDLEWFCEIQDLIFDKFQTDERFLESFKKSMGY
VKLLAELDLPKDRNSKFDLDDQSSVGEEPSIYDSSSIHSADARLESQDEGGPTSLEEVED
LSTTLTASRNSDSGLGSLTTSSTTMKSHKRTISDCSLLTAPSHRRNPSQGSLGSFNGGNE
FISIAGPVLRADIEKVESVREHGKTFAIYTVHVTSRDPSGVESFKYILRRYSDFHALHEK
IKSLFPPLSQLAFPSKRAFGNLERDVLQRRLNALNQYFQEILRIEVLTEYPKLLEILQKF
LEDPNHGKERAQFSQVAKAVGSVRSSVKSMSNAVTSVPGQLFVTVDNVVDGISKVLLSKP
VDASTLFEDSRVGAGLEMDNPGDNIPLRVILLFMDEVFDLRERNQWIRRYIISFLRQVLK
AMFGDIVNRRIIEYFAHLTSPSTLSTYLKACKESLWPQGYPAAPRPQRDESTKMRTRVAA
RVALYSSFSEDLKRAIGSETSRAGLQMLFDMVQHPVLNKRLAILLLEGFLGSLFHEENFP
ALFKRLHSRSGRVRDELKNSHRKGSDLRRN
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgacattatatgcgcagtcgtttttagtgatcaatatggagcggaaatggatttttatc
gccctagccctcggtttcgtgtccatggggacgcaaggtctcgttctggtcgtgttgtgt
tcagtgctgctcgtgaccggtgtattgtgcactttgtttgccttgagtgacaccgttcag
ttccgacaaaggctgctggattcgactcaacggtacaaacaaatttccccgggcagcgtt
gcccaaccttttaaagcggaagctcaactggccactgatccctcactaactggatatggc
aaattagatgaagaactagatgacattctgaactacgtgtttcgcgattatgtttactcg
tggctcttctccatctctcattccgatgaattcgtattgcaagtgcgagacacactccat
gtggttcttacctcattgtcggaacgcgtccgggccgtggactggatgcctttcttgacc
acaagacttgtcgacgatgtggccactcatgtgcggctcttcaagcgagcccggacgaac
tacagaacgaaaaaggacgtggcagacaatggcaagatcaccgacttggaatccctcttt
tttgatgccgaagtttctatggaaagagacgtgtgtagggatcttgtgtgtaccatccac
caggaggagataacttatcttcaagatgtttctgagctcctgcttttcctcctgttaccc
caggctgattttcgcgcaggccccttgagaactgtggtccgagagctcttggtcaatgtg
attttgagacccatacttgatgtggtgagcgatccagattggatcaaccagaatattgtt
tggctttacaaagattctgtgatcaagcctgatctattcagtacaacgctgaggttaacg
gagtccgtgcaagaactccaagctacacgagatatcgtttccgaccacatcaaccacctt
cgatccaatgactcgaaaggtgaggaggactcgtccttgaaacagcaattgaattcctta
ttgaatctgaggaagtccatcgataatcgcatcaaccgccttcagagtggttcggatacg
gattccattggtgtgcctactcacgtcgattggaggcaaatgatcgcacccggcctaacc
ctcttccccttgcccatcgaagtggtgctcaagaataacatagctttgagttatttcatc
gattacatgtcctcaatcgggtgtcagtcatacatcttcttttacctcaacatcgaagga
tggcgagtttcggctgaacagcagatcctccaattagatctggaggctttccggcgacaa
tcgaacgcccacgcgcctgaaagagatggggaggaagatacctttgtcaaagtagaactt
aatcggaaggatattctcgataagatgcgtgaagccgctcattccatatacgaggaatat
ctctcggagaaggccagtcctcggctgaaagtggacgactccgttgtcaagcgactccta
ttcaaaattcgaaccgagccgccagatttggaatggttctgcgagattcaagacttgata
tttgacaagtttcaaaccgacgagcgcttcctcgagtctttcaagaagtccatgggctac
gtcaaacttttggccgaactcgacctgccgaaagatcgcaattccaagttcgacttggac
gatcaatcgtccgtgggggaagagcccagtatttacgactcatcgagtatccattcagcg
gatgcacggctggagagtcaagatgaaggcggtccaacgagcttggaggaagtggaggat
ctcagtacaacgctcacagcgagcaggaactcggattccggactcggatctttgacgacc
tcgtccactaccatgaaatctcataaaagaacgatcagtgattgctccctccttactgcc
ccaagtcatcgccggaatccaagtcaaggaagcttgggctccttcaacggaggaaatgaa
tttatcagcattgccggtccggttctacgagcggatattgaaaaagtggaatcagttcgc
gagcatggaaagacgttcgccatctacacggttcacgttacgagtagagatccaagcgga
gtcgaatcattcaaatacattttaagacgatattctgactttcacgccctgcacgagaag
atcaagagtctctttcctccgctttctcaattggcatttccaagtaaaagagcatttggc
aatttggaacgcgacgtgttgcagcgacgtttaaacgccttgaatcaatactttcaggag
attttgaggatcgaggttctcactgaatatcccaaattgctcgagattttgcagaagttc
ttggaggatcccaatcatggtaaagagcgggctcagttctcgcaagtggctaaagctgtg
ggctccgttcgaagttctgtcaaatcgatgtccaatgctgtcacttcagtgccaggacaa
ctctttgtgactgttgataatgttgtggatgggattagcaaagttctgttgtcaaagccg
gtagatgcctcaacgttgttcgaggatagtcgggtcggcgcaggtcttgaaatggacaat
ccgggtgataatattccattgagagttattctcctattcatggacgaagtgtttgatctg
agggaacgcaatcagtggattcgacggtacatcatttcgttcttacgacaagttctcaag
gccatgtttggtgatatcgtcaatcgacgaattatcgaatactttgcccacctcacttcg
ccttccaccttgagcacttatctaaaggcttgcaaagaaagcctctggccccagggatac
cctgccgctccccgaccccagagggacgaaagtaccaaaatgcgaactcgagtggcagct
cgagtggccctctactcgagcttctcagaggatttgaaacgtgctattggctcggaaacg
tcccgagctggacttcagatgctcttcgacatggttcagcatcctgtattgaataagcga
ttggccatcttactcttggaggggtttctcgggtcactcttccacgaagaaaatttcccc
gcactctttaaaagactgcattctcgatctggacgagttcgagacgaactgaaaaactcg
caccgcaaaggctcagaccttcgacgaaactag
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integrated database retrieval system
