Tigriopus californicus (tidepool copepod): 131887321
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Entry
131887321 CDS
T09700
Name
(RefSeq) rhomboid-related protein 2-like
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tcf01002
]
131887321
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
131887321
Peptidases and inhibitors [BR:
tcf01002
]
Serine peptidases
Family S54: Rhomboid family
131887321
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_1
EF-hand_6
Acyl_transf_3
DUF3087
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
131887321
NCBI-ProteinID:
XP_059091884
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All DBs
Position
9:8724259..8726373
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AA seq
430 aa
AA seq
DB search
MNTMTQSHEDQVGQHAHPTCSTDLAHLHQLCFPLIQRSLSLQGSGDQVDYGTPLTPLSEG
SVPGYDQVDAKGTFKLRDIEKELKENVGRQHLENELGLSWTKIREVLKRADKNGDGKAQY
GDFLLALQHYRIDSEECGPFKKMVRAFAYVEEFHTFPPPLFISIVTLMELGIFIYHAVHL
PRAHGLPMTWEGPVPYCSVLIYNPFRRWEAWRFLTYMFVHIGIGHFVFNIIMQLIVGLPL
EMQQEGWVGSLRVAMVYLCGVVAGSLGTSLVDAYTYMAGASGGVYALIAAHLSTLILNWK
EDSSIRIKKVIHQPLTRIVRLLFIVLLTVHDLGLAIYVRYYAQEENRTGFMGHLCGAIAG
FLVGVFVLDNRRVQRWEVIWQRIAWGIFLALIGAAILWNGVGNLCTNNSFFPPSDFRALD
GDSGNCQLYL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgatgacccagagccacgaagatcaagtgggtcagcatgcccatcccacctgc
tccacggatttggcccatctccatcagctctgtttcccgctgattcagcgctcgctctcc
ttgcaaggatccggcgatcaggtggattatggcacgcccctgacccctttgagcgagggc
tcggtacctgggtacgatcaagtcgacgccaaaggcacattcaagcttcgcgacattgag
aaagagctcaaagagaacgtgggtcgccaacatttggagaacgaattgggtctgtcgtgg
accaaaatccgggaagtgctcaaacgcgccgataagaacggcgacggaaaagcccaatac
ggagactttctgttggccctccagcattatcggatcgacagcgaggaatgcgggcccttc
aagaaaatggtccgggcctttgcctacgtggaggagttccacacgttcccgccgcccttg
ttcattagcatcgtgactctgatggaattggggatcttcatctaccatgcggttcactta
cctcgagctcatggactgcccatgacttgggaagggcctgtgccttattgctcagttttg
atctacaaccccttccggcgttgggaggcgtggcggttcttgacctatatgttcgttcat
atcgggattggccatttcgtgtttaacatcatcatgcaactaatcgtggggctcccgctg
gaaatgcaacaggagggctgggtcggttctttgagggtggccatggtttatttgtgtggg
gttgtggctggttccttgggaacatcgttggtggatgcctatacgtatatggcgggtgcc
tcgggcggtgtgtacgcattaattgccgcccacttgtctacgttgatcttgaattggaag
gaagacagttccattcgcatcaagaaggttatacatcaaccattgacgcgcatcgtccga
ttattattcattgttctactcaccgttcatgacttgggcttggccatttatgtcagatat
tacgcccaagaagagaaccgcacgggttttatgggccacttgtgcggggctatcgctgga
tttctcgtgggggttttcgttctggacaatcgacgggtccaacgttgggaagtcatatgg
caaaggattgcttgggggatctttctcgccctcatcggggcggccatcctgtggaatggc
gtgggcaacttgtgcaccaataactcgttcttcccgccctcagattttcgcgccttggac
ggcgacagtggtaattgtcagctgtacctgtga
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