Tigriopus californicus (tidepool copepod): 131887326
Help
Entry
131887326 CDS
T09700
Name
(RefSeq) nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcf03036
]
131887326
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
131887326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
TPR_TNPO3_IPO13_4th
Motif
Other DBs
NCBI-GeneID:
131887326
NCBI-ProteinID:
XP_059091892
LinkDB
All DBs
Position
9:8727352..8736467
Genome browser
AA seq
2171 aa
AA seq
DB search
MDPQQNGHYGSGGGVGGGPAVNGEMPSVPITTLSGIASLTDLLPELPVPGPAPHGNPNPG
SKLLYHASLVEEANQLLSHANPALVEQLERVLARTSVDYIELSDPHAVPSALPANRLVAS
LCQTNPALFGTIQNAASAVGPLAPGWTGTPSGNTGFHNRFHGESTAFPPGANFTAQGGST
PDNGARLNNFAAVNQNFPAAGGFEEDNKFLPGSQFQAGMDPNAGSVSGGANFPHPANNVG
SNATPGSDVLPDLENGTQIKAEMKPVIVPIIKDESKSNLNNVKQPMIKLNMLNADAAELM
TKSVKDYNKLNSDQVKMEEQGVYDNFTPRSQRSRHAKVVDMGSSDSEEDDSVETGDKKPK
NKFFKATEKERDDEKKRLREFRKRKVVDDDFQPSGAEEQFGKRRRKEATPTPASPESFVP
KKVTRTLERKLIPMVPKINADELMEDSNTFLRFNKTVELIFDNMEDVNMQDLEALDDDAD
IPQEILIPKYQLADLAAETAKLKSLGVMESVSHDRLVKLLNILELNIRDGARVTPVGGYD
DDEDNDDRLYMELAMERVMRAADASLAVMHILTSKKMSKRVYIDDVIDRVALFLRYQLAN
TIYPSYDPVYKEISKSKTGYVGSMKKKRTYATNVKDKSILALYNKTHELTSMLAELIRMQ
LLTDTTILHISTMGVAPFFVESIPELQLAALKLVTNLFGRYEKHRKLLLDDILASIARLP
SSKRSLRSYRLGPTTYIQMLTALVLQLIQCVVCLPRKLALKNANELKNKAKDDDIMETDA
QPGVDRDVLINNKYEMAMATAHQFLTVFLKKCGSKNEDIDYRPLFENFVQDLLTTVNVPE
WPAAELLLSLLGRVLREKFKDRSTEMALRISSLEYLGVVAARLRKDAVQSKMKVDYIDSI
IEIIKSEDAPEPSASDTPQKSKKGKNKKPKTEKPQVESEEVEDERSSFLQRVLLDYLVVS
GGEEDQSVMNARHFYICQWYRDMNAVGRKPKRRPQKSQSSSKKKKGSDSSEDESDPSEEE
EEEQQLSDSKKNELYRLREVKKDAILNKILPFGTSKSNKAQVLTTHIDAASAHLIVKYLS
SKRPFFNSFNYYLKDILHVLTEQSTQIRTKALKCMTMVVSEDPEVLLRKDMQKGVQFSFT
DSSTMVREAAVDLVGKFILHKQDLITQYYTIITDRILDTGVSVRKRVIKILKDICIEFPG
YEKIPEICVKIIRRINDEEGIRKLVMEVFSNMWFVPLRERGRSQEDNELLVTRAQNITDV
VVACRDTGLEWFEQLLETLFQPREDKDDSTKKATEPPPQLVMACQQIVDCLVESVLRIEE
SNLSSGEGPRAKSLGSSNRIVACLTTLYLFAKIRPQLLVEHVQTLQPYLQVQCQTQGDYQ
IISNVARTLELSVPLIKHPSEIFLSQLEEDAVKLILQHDKKVVSACLSCLGSIVNNVTKN
FGLIRDCFVKYFSFMTKYRKHHEVNPDDPRCKEQRTLAWFRRAMFTVSQLLRHFDFTDVA
LYTGLVCGKETVEDVFETIFHFITHDSKEIQSDTLHALGLICVRHYNFMLETKLKQLYID
ILSENFYSEYQKVKVLNNLELYLAEEEVRMRKLDENWKNYGEKENLKEMGDVNSGMASTV
IQVYLNAVLNSFVHPSVLVRQAALKVISLILAQGLVHPVQIVPYLICMSTDSEQKISHTA
DREMQEINKKYPGFIHMKLLQGIRLSHQLQEIVQGRQPAVRGHRVVREGELPTALNGFLY
SILKSTKVQRRGVLTSLLKQFDDSSKSTLSVMLYLADNLAYIPYTVLDEPLFVIHNIDIM
VSVSGSNLLQGFKEALQPPPSAEARHNLETGKTDYIYDEDLDDDFESVLSRLPEDCTVLQ
DAIRGSQGCMLLLVLKDHLKDFYGLTTGKIQQYSPNDTSKAFDRQVTRRANVRFNPKATI
EILKQGSQASVPDIEGRKELVRKYLEFKELMTKIDPDDEDEEDEDGNRNSESSPQKKSTS
NTPGYNPSPAKHSQVNNHQGSQKHYQDQSQSHPSNHPPVPSPQQQQQLQRQLQHQQRRHE
RAAASASTMFPPMGPPGMGGEELVLDPSSGMMVPQSQMGGEMTYPDGQSGVDCKDSSAQK
VKVPRIKINLGSSGNSHHNRHKSSSSSSSSHHRDRSSSGSSRPKKKKKKSKRISDEDDDS
SPEDSDPDFKG
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcaacaaaacggccattatggttcgggaggcggagtgggtggaggacctgcc
gtgaatggcgaaatgccgagcgtacccattaccaccctctccggcatcgccagcctcact
gatttgttgcctgaattgcccgtaccgggcccagccccacatggcaatcccaatcctggg
tccaagctcctataccacgccagtttggtggaagaagccaatcagctcttatcgcacgcc
aatccggccttggtcgaacaactcgaacgggtcttagctcgcacctccgtagactacatt
gagctcagcgatccccatgctgtgcccagcgccttgccagccaaccgcttagtggcctcg
ctctgtcaaaccaatccagccttattcggcaccattcaaaatgcggcttcagctgtggga
ccgctggcaccgggctggacggggacgcccagtggcaatactggcttccacaatcgcttc
cacggcgaatcaaccgccttccctccgggtgccaatttcacggcccagggagggtctacg
cccgacaacggtgctcgactcaacaattttgcggctgtcaatcaaaatttcccggcggcg
ggtggctttgaggaggacaacaaattccttcccggctctcaattccaggcgggcatggat
cccaacgcgggcagtgtgagtggtggtgctaacttccctcatccagccaataatgtgggt
tcaaacgccacacccggctcggatgtattgcccgatcttgaaaatgggactcaaatcaag
gccgagatgaagcccgtgattgtgccgatcattaaagacgaatcgaagtcgaatctcaac
aacgtgaaacagcccatgatcaagttgaacatgttaaacgctgatgcggccgagctaatg
accaaaagtgtgaaggactacaacaaattgaactctgaccaagtgaaaatggaagagcaa
ggtgtgtatgacaatttcacgccccgttcgcaacggtcacgacatgctaaagtggtggat
atgggttcaagtgactcggaagaagatgattccgtcgaaacaggggacaagaagcccaaa
aacaaattctttaaggccaccgagaaagaaagggatgacgaaaagaaacgccttcgtgaa
ttccgaaagcggaaagttgtcgacgacgactttcaaccttcgggcgcggaggagcaattt
ggtaagaggagacgtaaagaagccacgcctactcccgcctcgccggaatcttttgttccc
aaaaaagtgacgagaactttggagagaaagctcattcccatggttccgaaaatcaatgcg
gatgaactaatggaagattcgaacacttttctccgattcaataaaaccgtggagctcatc
tttgacaatatggaggacgttaacatgcaagacttggaagcattggacgatgatgccgat
attccgcaagagatcctgatccccaaataccagctagccgatttggcggctgagacggcc
aaactcaaatcgttgggcgtcatggagtccgtgtcgcacgatcggttggtcaagctactc
aacatcttggaattgaacatccgagatggagctcgagtgaccccggtcggcgggtacgat
gacgatgaggacaacgacgatcggctatacatggaattggccatggagcgagtgatgcga
gctgcagatgcttccttggctgtcatgcacatcctgacttcgaagaaaatgtccaaacgg
gtttacattgacgacgtgatagaccgcgtagccttgtttcttcgctatcagcttgccaac
accatctacccgtcatacgaccccgtgtataaagagatctcaaagagcaagaccggctac
gtgggttccatgaaaaagaagcgaacctacgctaccaatgtcaaagacaagagcatcttg
gccctgtacaacaaaactcatgagctgacttccatgttagccgaactcattcgtatgcaa
ttgctcactgacaccacgatactgcatatttcaaccatgggcgtagctcccttcttcgtg
gaatccattcccgaattgcagctagccgctttgaaattggtcacaaatctgttcggtcga
tatgaaaagcatcggaagctcttactggacgatatcctggcgtcaattgcccgtctgcca
agttccaagcgatccttgaggtcatatcgtctcggccctactacttacattcaaatgctg
acggctcttgtgttgcaactgattcaatgcgttgtgtgcttacccaggaaacttgccttg
aagaacgccaatgagttgaaaaataaggccaaagatgacgacatcatggagactgatgct
caaccaggtgtggatcgagacgtgttgataaacaacaagtacgagatggccatggccact
gctcaccagtttcttacggtgttcttgaaaaagtgcggttccaaaaacgaggacattgac
taccgacctttgttcgagaattttgttcaagacctcctgaccacggtcaatgttcctgaa
tggcccgcagcagaactgctcctctcactcttgggccgtgtccttcgagaaaaattcaag
gatcgaagcacagagatggcccttcgtatctcgtcgctcgaatacttgggcgtggtggcc
gccagactccggaaggatgcggttcagtccaagatgaaagtggactacatcgattcgatc
attgagattataaagtctgaagatgctccggaacccagtgccagtgacacgccacagaag
agcaaaaaggggaagaacaaaaagccaaagacggagaagccccaggttgagagtgaagag
gtggaggacgagagaagcagcttcctccagcgagtgcttttggattatttggtcgtgagt
gggggagaagaggatcaatctgtgatgaatgctcgacatttctacatttgccagtggtac
cgtgacatgaatgccgtgggccggaaacccaaacggcgacctcaaaagtctcaatcttct
tcgaagaagaagaaagggagcgattcctctgaagacgagagtgacccatccgaagaggag
gaggaagaacaacaactgagcgacagtaaaaagaacgagttgtaccgccttcgagaggtc
aagaaagacgccatcttaaacaagatcctaccttttggcacgagcaaaagcaacaaagct
caagtcctcaccactcacatagacgccgctagtgctcatttgattgtcaagtacctctcg
tccaagcggccgttcttcaactcgttcaattactacctgaaagacattctccatgtgctc
acggagcagtccacgcaaattcggacgaaagctctcaagtgcatgaccatggtggtatct
gaagatccagaagtgctcctccggaaagacatgcaaaaaggagtgcagttctccttcacg
gactcatccaccatggtgagggaggctgccgtggatttagtcggcaaattcatcttgcac
aaacaagacctgatcactcagtattacaccattatcaccgaccgtattctggacacgggc
gtgagcgtgcggaaaagggtcattaagattttgaaggatatctgcatagaattcccgggg
tatgagaaaatcccggagatctgtgtcaagatcattcgacgcatcaacgacgaggaaggt
attcgcaaacttgtcatggaagtattttccaacatgtggtttgtcccactacgagagcgc
ggtcgatcccaagaagacaacgagctgctcgttacacgtgctcaaaatataacggatgtg
gttgtggcttgtcgcgatacaggactcgagtggtttgagcagctgcttgaaacgcttttc
caaccccgcgaggacaaggacgactcgaccaaaaaggcgaccgagcctccccctcaattg
gtcatggcgtgtcagcaaatcgtggattgcctggtggagagcgttctccggatcgaagag
agcaacttgagttccggtgaaggcccccgggccaagtctttgggctcgtctaatcgaatc
gtggcttgtctcacaaccttgtacctgtttgccaagattcggcctcaactactggttgag
cacgtgcaaacactccaaccgtatttgcaagttcagtgtcaaacccagggtgattaccag
atcataagcaatgtggctcgaacgttggagctgtccgtgccgttaatcaagcatccaagt
gagatattcttgtcccagttagaagaggacgcagtcaaactgatcctacagcacgacaaa
aaggtggtgtccgcctgtctttcgtgtttgggctccattgtgaacaacgtgacgaagaat
tttggcctcattcgagattgttttgtcaagtacttcagttttatgaccaaatatcgcaaa
catcacgaggtgaatccggatgatccgagatgcaaagagcagagaaccttagcttggttt
cgacgagccatgtttacggtgtcccaacttttacgacattttgacttcacggatgttgcc
ttatacacgggattggtctgtggaaaagagacggttgaagatgtatttgagaccatcttc
cacttcataacccacgactcaaaggaaatacaatcggacactctccatgccttgggattg
atctgcgtacgtcattacaacttcatgttggagaccaaactgaagcagctctacattgac
atcctttcggagaacttttattctgaatatcaaaaagtcaaggtactgaacaatctggag
ctctatttggccgaagaagaggttcggatgcgcaagttggacgagaattggaagaactat
ggcgagaaggagaatctcaaagagatgggagacgtgaactcgggcatggcctcaactgtg
attcaagtgtatctgaatgctgtactgaactcgttcgttcatccgagtgtgttagtgcgg
caagctgcgctgaaagtgatctctctcattctggcccaaggcctcgtgcatcccgttcag
attgtgccctatctcatttgtatgtccacggacagtgagcagaagatctcgcatacggcc
gaccgagagatgcaagagatcaacaaaaagtatccaggattcattcacatgaagctgttg
cagggcattcgtctgtcgcatcagcttcaagaaatcgtgcaaggtcgccaacccgcggtt
cggggtcaccgagtggtcagagaaggagagttacccacagccctgaacgggttcctgtat
tcgatcctcaagagcaccaaagttcaacgtcgaggcgttctcactagtttactcaagcaa
ttcgatgactcatcgaaatcgacactaagtgtgatgttgtacctggcagataacctcgct
tacatcccatacaccgtgttggatgaacccctgtttgtgattcacaatattgatatcatg
gtgtccgtgtcgggctcgaatctcttgcaaggtttcaaggaagctctccagccaccaccc
tcggcagaagctcgccacaatcttgaaacgggaaagactgactacatctacgacgaggac
ttggacgacgatttcgagtctgttctctcgcgtctcccggaggattgtacggttttgcaa
gacgcaattcgtggctcgcaaggctgcatgcttctactcgtactcaaggaccatctcaaa
gatttctacggtttgaccactggcaaaattcaacagtattcccctaacgacacctccaaa
gccttcgatcgccaagtcacacgacgagctaacgttcgtttcaacccgaaggccacaatc
gaaattctgaagcaaggctcccaagctagcgttccagacattgaagggaggaaagaactc
gtccggaaatatttggagttcaaagagcttatgacaaagatagatccggacgacgaggac
gaagaagacgaagatgggaatcgcaattccgagtcctccccgcaaaagaaatctacctcc
aacacgcctggttataatccctcccccgccaaacattcccaagtcaacaatcaccaaggc
tctcaaaagcattatcaggaccagtctcagtcccacccctccaaccatcctcctgttcca
tctccgcagcaacaacaacagcttcaacgtcaactgcagcaccaacaaagacgccacgag
cgcgcagcagcttcggcgagtaccatgtttccgcccatgggacccccaggaatgggggga
gaggaattggtcttggatccctcttcgggcatgatggtgccgcagtcccaaatggggggc
gagatgacgtatccagacggtcagtcgggtgtggattgcaaagattctagcgctcagaag
gtgaaggtccctcgcatcaaaatcaatttgggatcctccgggaattcccatcacaaccgt
cataaatcctcgtcctcatcctcgtcgtcccaccatcgagatcgaagttcatcgggcagt
agtcggcccaagaaaaagaagaagaaatcgaagcgaatctctgacgaggatgacgattcc
tctcctgaggattcggatcccgatttcaaaggctaa
DBGET
integrated database retrieval system
