Tigriopus californicus (tidepool copepod): 131887364
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Entry
131887364 CDS
T09700
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site) endonuclease 2-like
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcf03400
]
131887364
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
131887364
DNA repair and recombination proteins [BR:
tcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
131887364
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
131887364
NCBI-ProteinID:
XP_059091937
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Position
9:complement(14720148..14722361)
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AA seq
470 aa
AA seq
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MKILTWNVNGLRSLKGDLAVMLDDLSADIVCFQETKITRDMLEEPLALVQGWSSYFAFSR
KRTGYSGVATFCRTHVTPIDAQEGLTYPSADLPDLATEFSSAELKDLEAEGRAVVTVHQL
HDDRTLALFNLYCPRADPERADRLAFKYNFYKLVELRAHHHLRQGHHVLIVGDVNTSHRS
LDHCDPYEEFEMHPGRQWLDHLLFPPNPKTRNTPVQVSEDEEQPWACLNVQLEPHQFVDT
FRHFHPERANAFTCWNTKMNCRSTNYGTRIDYILADRGLIPHLGQCDIHPEIEGSDHCPV
KCELNVTVVPSPKLPKSXTKNFPEFAGQQQKLSQFLQVRSKRSIGVDEPAVPPKKVKVEK
PTQKTLHSFFQKTVKETKIVLETHPSSSPEPVVQVQEWVEQRTSSSALAWKALFKGPPPA
PQCKGHNEKAILRTVKKKGPNAGRQFWCCGRGEGKADDPQARCDFFKWVK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttaacgtggaacgtcaacgggttgcggtcactcaagggggatctcgcagtc
atgttagacgacttgtcggctgacatcgtttgctttcaagagaccaaaatcacccgtgac
atgttggaagagcccttggctttggttcagggctggtcttcctatttcgccttctcacgc
aaacgcacaggctattcgggcgtggccaccttctgtcggacccacgtcacgcccattgac
gcccaagaaggcctcacttacccttcagccgaccttccggatctcgcaaccgaattctca
tccgctgaactcaaggatttggaggctgaaggccgagccgtggtcaccgttcatcaatta
catgatgatcggacattggcacttttcaatttatattgtccccgagctgatcctgaaaga
gccgataggttggcttttaagtacaacttctataaactagtcgagctccgggctcatcat
catttacggcaaggtcatcacgtcctcattgtgggcgatgtgaatacgtcccaccgaagt
ctagatcattgcgatccctacgaggaattcgaaatgcatccaggtcgtcaatggttggat
catttactcttcccacctaatcctaagactcgtaacacccctgttcaggtctccgaggac
gaagagcaaccttgggcgtgccttaatgttcaactggaaccccatcaattcgtcgacaca
tttcgacactttcacccggagcgagcgaacgctttcacgtgttggaataccaaaatgaac
tgtcgatccaccaattatggcacaagaatcgattacatactggccgatcggggtttaatc
ccacatttgggacagtgtgatatccatccagaaatcgaaggcagtgatcactgcccagtg
aaatgtgaattgaatgtgaccgtggtgccatcacccaaacttccgaaatcctgaaccaag
aactttccagaatttgctggacagcaacagaaactttcacagttcctacaggtccgctca
aaacggtcaataggagtggatgagcccgctgtgccgccaaaaaaggtgaaagtcgagaag
cccactcaaaagacactacattccttctttcaaaaaactgtcaaagaaaccaaaatcgta
ttagaaacccacccgtccagcagccctgaacccgtggttcaagttcaagaatgggtggag
caacgcacaagttcctctgctttggcgtggaaagccttatttaagggccccccacccgcc
ccacaatgtaaaggacacaatgaaaaggccattctccgcaccgtcaaaaagaaaggccca
aatgccggtcgacagttctggtgttgcggacgcggtgagggcaaagctgatgacccccaa
gcccgatgtgacttctttaaatgggtcaaatga
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