Tigriopus californicus (tidepool copepod): 131887476
Help
Entry
131887476 CDS
T09700
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131887476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131887476
Membrane trafficking [BR:
tcf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
131887476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Vps39_1
zf-Vps39_C
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
131887476
NCBI-ProteinID:
XP_059092080
LinkDB
All DBs
Position
9:14527481..14537008
Genome browser
AA seq
862 aa
AA seq
DB search
MTSSANLRAFELCPILDRTHLDAQVLVECVELSGEWLFLGTSDGRLLQFLLHEDHPAEET
LDPRVQIRAQIVAEKKISQTHQSVSFIRCVSALNRVLVICDSQFIVLSMSDDLVSLPLAG
ANKLKGVHAAYINENPARDDPFSVQVCLAKKKQVIVVTLSEEKLVVDKIREMPDLVSDVV
MDGLFVCAALQSHYVICHIESGLIQDLFPFEGVPALCRVAKEEFLLSAPGDLGMFVTSAG
VSERPPLPWAKPVVRLVFKAPYIISLCSDGIVAYSITDQQQKQSLHFSGGRVLGNFDGKI
LVSSASSLYAIVPIPAEIQIKSLLEHGLVDQALELAENFQHRGRSSREQFQVVLNDVRQR
AGFVCLKKFDFDRARELFIRGQLNPQELISLFPDISSGKYVTIQPPLHDFQSIQDITNGN
PDQEKSLNSFLEDFLQYLRASEGEHFPFKNIVDTAIIKLVAADEPRKTLDHISSSDFQGE
FEDLKAPLESHQRFHALALLHEKHRNWSEALSIWASLAQNEIQDDLFPGLSLFLQKIVRA
PDELLWRYGDLALELDQDKAIDVFIQKLKSGDVVMEEKALNFLDKYPDAHLKLLEHLVLE
KESQTEKFHTLLATKYLERLSSLDLQDQLALPIRAQFQAFIVQSNLIKPAHLMSRLESTD
LHQEKAILYGKMGNHEKALKIMVHNLDDPQAGESYCDQIAPKKDSKLKKRLLLSLIKVFL
DPELSPEKKLPLESALVDLLNRRSSEMNPLDVLPLIPPSWSLATILPALTDMIATLGHEK
RMTQVEANLSIGHNVNTALDYYFATRKPIEMAESSYCMVTSKQFREPVFVRYPNGIIVNP
DQAKNLSVCPITGQVFKPIKGT
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgacttcatcggccaatcttcgagcttttgagctatgtcccatcctggatcggacccat
ctggacgctcaagtgctggttgagtgcgtggaattgagcggggaatggcttttcttgggc
acctcagatggacgccttctgcaattcttgctccacgaggatcatcctgcggaggagacc
ctagatccacgggttcaaattcgggctcagatagtggctgagaagaagatctcgcagaca
catcaatccgtgtcgttcatccgctgcgtttcggcattgaatcgagtcttggtcatttgc
gattcgcaattcattgtactgtccatgtcggatgacttagtgtctttgccattagctggc
gctaacaagctaaaaggcgttcatgcggcttatatcaacgaaaacccagcccgtgatgac
ccgtttagcgtacaggtttgcttggctaagaagaagcaggtcatcgtggtgacgttaagc
gaggagaagttggtggtggacaaaattcgggagatgccggatctcgtttcggatgtggtc
atggatggcctctttgtatgcgccgccctccaaagccattacgtcatttgtcacattgag
agtggcctgattcaagacctgtttccttttgaaggcgtacccgccttgtgtcgagtggcc
aaggaggaattcctattgagcgccccaggggatctaggcatgttcgtcacctcggccgga
gtatcagagagacctcctctgccttgggccaaacccgtggtcagattggtcttcaaggcc
ccatacatcatctcgctttgttctgatgggattgtggcgtacagcatcacggatcagcaa
cagaagcaatccttgcatttctccggaggacgtgttctcggcaatttcgacggaaaaatc
ctggtctcatcagcctcgtccttgtatgccatcgtgcccattccagccgaaattcaaatc
aagagtttactagaacatggtttagtggatcaggccttggaattggcggagaacttccaa
caccgaggacgctcttcccgcgagcagttccaagttgttctcaatgacgttcgccaaagg
gcgggatttgtttgcctcaaaaaattcgacttcgatcgagctcgagagctatttattcga
ggtcaattgaaccctcaagagttgatttcgcttttccccgacatttcatcagggaaatat
gtgacaattcagccgccactccatgacttccaatccatccaagacatcaccaatggaaat
cctgatcaagagaagagcctcaattcgttcctcgaggattttttgcaataccttcgagct
tcagaaggcgaacatttccctttcaaaaacatcgtggatactgccataattaaactggtg
gccgctgacgagcctcggaagactctggatcatatctcgagctcggattttcaaggcgag
tttgaagatttgaaggctcccttggaaagccaccaaagattccacgccctggctttactc
cacgaaaaacatcgaaattggagtgaggctctctccatctgggcttctctggctcaaaat
gaaatccaagatgatctctttcccgggcttagcttgttccttcagaaaatagttcgagcc
cccgatgaattgctttggaggtacggagacttagccctagagctcgatcaggacaaagcc
atcgatgttttcatccagaagctcaaatccggtgatgtggttatggaggagaaagccttg
aacttcttggacaaatatcccgatgcccatttgaagctcctggagcatttagtattagaa
aaagagtcgcagacggaaaaattccacaccctcctggccaccaagtatctggagcgtttg
agctccctcgatcttcaagaccaattggccctcccaatccgggcccagtttcaggccttc
attgtccagtcaaatctgatcaagcctgcccatttaatgtccagactcgagtcgaccgat
cttcaccaggaaaaagccattctctatggcaaaatgggcaatcacgagaaagcattaaag
attatggtgcataatttagacgatcctcaagccggtgaatcctattgcgatcaaatcgct
cccaagaaagattccaaactgaagaagagattgctcctaagtctgatcaaagtcttcttg
gatcccgaactctcacccgagaagaaacttcctctggaatcggccttggtggatttgctg
aaccgaagatcaagtgaaatgaatccccttgatgtgttacctctcattccaccttcgtgg
tcattggccaccattctaccagctttaaccgatatgatcgccacacttgggcatgaaaaa
cgcatgactcaggtggaggcaaacttatcgattggtcacaatgtcaatacggcactggat
tattatttcgccaccagaaagcccatcgaaatggccgagagcagttactgtatggtgacc
tcgaaacaatttcgagagcccgtgttcgttcgatatcccaatggaatcattgtcaacccg
gatcaagccaaaaatttgagcgtctgcccaatcacgggtcaggtgttcaagcccatcaaa
ggaacgtaa
DBGET
integrated database retrieval system
