Tigriopus californicus (tidepool copepod): 131887695
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Entry
131887695 CDS
T09700
Name
(RefSeq) WD repeat-containing protein 11-like
KO
K24260
WD repeat-containing protein 11
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131887695
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tcf03037
]
131887695
Membrane trafficking [BR:
tcf04131
]
Endosome - Lysosome transport
Others
Others
131887695
Cilium and associated proteins [BR:
tcf03037
]
Other cilia and associated proteins
Other cilium assembly proteins
131887695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
TPR_WDR11
WD40_CDC20-Fz
Beta-prop_WDR11_1st
WD40_Prp19
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_RIG_2nd
TPR_GEMI5
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
PEP5_VPS11_N
CC142_N
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
131887695
NCBI-ProteinID:
XP_059092326
LinkDB
All DBs
Position
10:12586009..12590333
Genome browser
AA seq
1241 aa
AA seq
DB search
MMDRRRSSTPGAADAPLRQIAPVMQRTITGAASLGNRLAVDWSPLCGLVATGSNSMVVVT
DPLTLQTLQVLETHRSTVIRVMWARSPTSKHPADRLTLASSDATGHIVIWNAKSGETKAI
LQDGPKAVTELAWCDGRYENTGHLLAALHPPFALVLWDTSTGSAVWRKTYTETLQGFDFD
PFDASRLAFRCLECVLFVDDFNPAKPPQGAGRKFYVLGPARNSPNRGSVDSSTPAGTPMG
APPEDKGKTRRTRIKKIMKDLVMGEFQPQGSSSLTLSDCVQVLYHRSVRNHLLLVYPREV
LILDLDIGQTVGLVSIDRTSTPILQVYPCRHRDAMYILSESGTLSLRVRKRLYGVSSTPI
EPIRNMSKAVSTSSIASVNTVDTASDNFTLDNVLEIFYEQKAHSDCIRLQKHAKILGMAL
DNIRENSVTIFTSDGRLILVDIAQSNQASGKVIVYSLPDLIPPTLSMQTGDLMGLKLFTR
GIVSGLCLPAFHIRMCPPLTMKNLSEYVPYMAIGGQNGNIQLTNMSTGRIERDFAVHTYP
VRGLEWTSLNTVLSHAHQNLLSSTSSNSLVRNELIHTDVRTGKTQALRSHRSEEPAIEML
RVSHLKQYFIVAFQGAPFELWDLRTMTLLRTMPKKFPAITALDWSPLHNLKSLKRKMNAV
EEKENKRDTDSDHAKDENGSKPTEKASSNSSIVAKEHFVFTDPEGQLYHFSVEGNAIRDG
TRVPAESSLGTITCIAWKSDHIVRGDSDGNINVWDVKTRTSRNIATNRGPIKKMRLAPGR
GNLKLLILNPDSVSIWEMKECELINELRTPKDMVKVMDIDWAASDRPVLATVDGCLRVMG
LALASASSAMYEYNVDESAACHALLPNKERANFQILLHHQPWRSIFSLDFTSADGFNENS
LAFVKEQIGFIRQDVRSQLEDPTTPTALRGLLASQMSGMKWEADFWRLALSNLKPGDFSL
VDTNFDLALDAESFLRFHLEKISLHQSRCSTHAQKKRVVDLMLCLNQKEEAIRLLLDTEP
DSPNYYEDSLKACLVATTSAAQKDTPHSTTKLVATNLIAEGKLWEGVQLLCLIDKVVDAC
NYLQSCGQWDASLWLAKCRLSGHPDLAKVAGKYCEHLLAKDLKKQAILVYLSLKDFVSTL
DCLVNAKMIGLAAQFLQACQEMKLLPDTSHMMVLNEEISLAYARHLFDTGNAEGAFYYCD
RADEKGEILRRELEMLANSKKLTVPLESLEDVDKSDEDFKN
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcgtcgacgctcttccacgccaggggcggccgatgcgccgttgcggcaaatc
gcacccgtgatgcaacgtaccatcacgggtgcggctagtctgggcaaccggttagccgtg
gattggagcccgttatgcgggctggtggccactggctcgaatagtatggtggtggtgacg
gacccactcaccttgcaaaccttgcaagtgctcgaaacccaccgtagtacggtcatccgg
gtgatgtgggcccgcagccccacctccaagcatccggcagaccggttgacgttagcctca
tctgatgccacgggtcatattgtgatctggaatgccaaatccggcgagaccaaggccatt
ctgcaagatgggcccaaggccgtgaccgaactagcatggtgtgacgggcgttatgaaaac
acgggccacttattagccgccctgcatccccccttcgcccttgtgctctgggacacgagc
acgggctcagccgtgtggcgcaagacctacaccgagaccttgcaaggctttgatttcgac
ccgtttgacgcctcacgtctggcctttcgttgtttggaatgtgtgctgtttgtcgatgat
tttaacccggccaaaccgccccaaggtgccggtcgaaaattctacgtccttggacccgcc
cggaatagtcccaatcggggctcagtggattcaagtacacctgcgggtacgcctatgggt
gctcctcccgaagataaaggcaagacgagacggacccggatcaaaaagataatgaaagat
ttggtcatgggcgaattccaacctcaaggctcgagttcgctcacgctatcggattgtgtc
caagttttgtaccatcgctcggtgcggaaccatctgttattggtgtacccgcgagaagta
cttattctggatctggatatcggtcaaacggtgggcctggtctcgatcgatcgaacctcc
acgcccattcttcaagtgtatccgtgccgacatcgagacgccatgtatattctaagcgaa
tcgggtaccttgagcttgcgtgtacggaaacgcttgtatggtgtgtcgtccaccccgatt
gaacctattcggaacatgagcaaggctgtatccacatcaagtatcgccagtgtcaacact
gtggacacggcgtcggataattttaccttggacaacgtgttggaaatcttttacgagcag
aaagcgcacagcgattgtattcgcttgcaaaagcatgccaagatcttgggcatggctttg
gataacatccgggagaatagtgtgactattttcacttcggatggtcggctgattttggtg
gacattgcgcaatcgaatcaggcgtctggcaaggtgattgtgtattctctgccagatctg
attccgcccacattgtccatgcaaaccggagatctcatgggattgaagctgtttacccgt
ggcattgtttccgggttatgtcttcccgcgtttcatatccgaatgtgtccgccactcacc
atgaaaaacctgtcggagtatgtgccctatatggccataggaggtcagaacgggaacatc
caactgaccaacatgtctaccggacgtattgaacgagattttgccgtgcacacctatccc
gttcgtggactagaatggactagtctgaacaccgtgttgtcccatgcacatcagaatttg
ttgagttccacctcgtccaattcgttggtccgcaacgaattgatccacacggacgtacga
acaggaaaaacccaggccctccgatcccaccgttctgaagaaccggccattgagatgctg
cgggtgtctcatctaaagcaatacttcattgtggcctttcaaggtgcccctttcgaatta
tgggatttgagaaccatgactctcttgaggacgatgccgaagaaatttccagccatcacc
gctttggattggtccccacttcacaatctcaaatctttgaaacgaaagatgaacgctgtg
gaggagaaggagaacaagagagatacggacagtgaccatgccaaggatgagaatggttcc
aaaccaacagaaaaagcatcatcaaacagctctattgtggctaaagagcattttgtgttc
accgatcctgaagggcaactctatcacttctctgttgaaggcaacgctatcagagatggg
acaagggtgcccgcagaatcgtctctaggaaccatcacttgtattgcgtggaaaagtgat
cacattgttcgcggagattctgatggcaacatcaatgtctgggacgtgaaaacacggact
tccagaaacatcgcaaccaatcgtggtcccatcaagaagatgcgtttagctcctgggcga
ggcaacttgaaactcctcattctcaatccggattctgtgtccatttgggagatgaaagaa
tgcgagctcatcaacgaactccgtacccccaaagacatggtcaaggtgatggatattgat
tgggcagcttcggatcggcctgttttagccactgtcgatggctgtctgagagtcatgggt
ctggctctggcctcggcctcttcggccatgtacgaatataatgtcgatgaatccgctgcc
tgtcacgcccttctgcccaacaaagagcgggccaatttccagatcttgctccaccatcag
ccttggagatcgatcttctctttggacttcacttcggcggatggctttaacgagaatagt
cttgctttcgttaaggagcaaatcggattcatccgtcaagatgtccgatcacagctcgaa
gatccgaccacacccaccgctctcagaggtctcttggcttctcagatgtctggaatgaaa
tgggaggcggacttttggcgattagctctctcaaacttgaaaccaggcgatttcagtctc
gtggacaccaattttgatttggctttagacgctgaatccttcttgcgattccatctcgaa
aagatcagccttcaccaatcaagatgctcgacgcacgcccaaaagaaacgagtggtggac
ctgatgctttgtctgaatcagaaggaagaagccattcgtttgctgctcgatactgagcca
gacagtccgaattattacgaggacagtctcaaggcgtgtcttgtggccacgacttccgct
gcccaaaaagacacacctcattcaaccaccaaattggtggccacaaacttaattgccgag
ggcaagctttgggaaggcgttcaattactctgtctgatcgacaaagtggtggatgcatgc
aattatctgcaatcctgtggtcagtgggacgctagtctttggttggccaaatgtcgatta
tccggacatccagatctggccaaggtggcagggaaatactgcgagcacctcttggccaag
gacctgaagaaacaagctatcctagtatatttatccttaaaggattttgtctccactttg
gattgtctggtgaacgccaaaatgatcgggctggccgcccaattccttcaggcgtgtcaa
gagatgaaactccttccagacacgagtcacatgatggttttgaacgaggagatcagtctg
gcttatgcgagacacctttttgatacgggaaatgcagaaggagcgttttactactgtgat
agagccgacgaaaaaggcgagatcttgcgtcgagaactggagatgctcgccaattccaaa
aagttgacagttcctttagaaagtttggaggatgtagacaagagtgatgaggacttcaaa
aattag
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