KEGG   Tigriopus californicus (tidepool copepod): 131887710
Entry
131887710         CDS       T09700                                 
Name
(RefSeq) uncharacterized protein LOC131887710
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
tcf  Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tcf03000]
    131887710
   04121 Ubiquitin system [BR:tcf04121]
    131887710
Transcription factors [BR:tcf03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    131887710
Ubiquitin system [BR:tcf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    131887710
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-CCCH zf-RING_2 Prok-RING_4 zf-C3HC4_4 zf-CCCH_4 PaaA_PaaC zf-C3HC4 zf_CCCH_4 Torus Vesi_VP2 zf-RING_10 zf-C3HC4_2
Other DBs
NCBI-GeneID: 131887710
NCBI-ProteinID: XP_059092349
LinkDB
Position
10:7254541..7261136
AA seq 992 aa
MPVQSPQWTEYLSCPVCENGFELRNRLPISLGCGHTICQTCLAQLRRRACPFDQGQIRLP
LNQLPVNTSLVLLIDADASLEQYRIKIEDESVTPHYVAATVQLEKLAQFLRVLSRPPLSR
PMQRKLVTLINCQLLEEEGRARVVRAARSLGERSVTELILQHQNPQQLSANLWAAVRARG
CQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKTSIGHVVQLLYR
ASCFKVTKRDGDSSLMQLKEEFRTYDTLRREHDAQIVQIATEAGLRIAPDQWSSLLYGDG
AHKSHMQSIIDKLQTPQSFLQSVQELIIALQRTGDPGNLGQLRPHLDFLAALDPNPESDN
PDWETLNSSLCSVYEVVQGLQAFIEQQTQSRKGSDGLNANPSAPNARYKTSMCRDLTSHG
SCPRGKNCTFAHSQSEMEQFRTSRKPKFVGKPPPVVGSVPPIVNSARGPVLGAKKDPMGM
GSPLTIPPVAQVAPLQRGFVAPTHLSTPVEPTIGHGMAQVMPMDEAYVNEVLHSNPGPIG
SFPSRDGVGMTSNEHGESAYHQTHTVMSVQPMTGGNLIKGSEHDSNFDRYPLRCESRNSH
LDIPEMTMATKSLGALKSRKEEIIDYLEDLVGKEETQTITKKASITIGNGNGPSSSQSPS
SLTVEKPQLRQSKSAPSQSNYSIWTSRSIATLPSPCENTQSEGKVATVAPNFIEDIAADV
CTSPSEFDLMEDGEKVPMGEVNIDTWHVGKSCLDEDEEMIPFSDTPQICRFGPISRKTGT
LLQLASPSQTQALMNDEPTPTAVVRHSKQLTRQVPSLASLYHQNGTRTTLQPVAIGANGE
ISYVAVPESSYPTTDVTLQQIQHNSALLSNVAPASQQSLFAESERMKHELEMLQKKISDL
NMAHIERQSTGSDPNSRYGVSSERDDLTRELQMIESTIRDRELEISANRLRIETGENTII
PLSSSFGAFAASHGMVHYDESGGVSSPCTSSA
NT seq 2979 nt   +upstreamnt  +downstreamnt
atgcccgtgcaatcgccccaatggaccgagtacctgagctgccctgtttgtgaaaacgga
tttgagctcaggaaccgcctccccatcagtcttggttgcggtcataccatttgtcaaaca
tgtctggctcaactcaggcgtcgggcgtgtccttttgatcagggtcaaatacgacttcct
ttgaatcagttgccggtcaatacttcgttggtgctcttgattgatgctgatgcatctttg
gagcaatatcgtatcaaaatcgaggatgaatccgtcacgcctcattatgtggctgctacg
gtacaattggaaaagctggctcaatttctcagagtcttgagccggcccccattgtcgcgg
cctatgcaaaggaaactggtcacattgatcaattgccaattacttgaagaagaggggcga
gcccgagtggtgcgggcagctcgatccttgggcgaacgatccgtaacggagcttattctt
cagcatcaaaatcctcagcaattatccgctaacctttgggcagctgttcgagctcgaggc
tgtcagtttttaggcccagctatgcaagaggaggtcctaaagttggttcttcttgccttg
gaagacggatcagctctgtctagaaaagtcttggtcatgtttgtggtgcaacggttagaa
cctcattttccgcaggcctccaaaaccagtattggtcatgtggtgcagctactttataga
gcatcttgcttcaaagtgacgaaacgtgatggtgattcatctctgatgcaactgaaagaa
gagttccgcacctatgacaccctccgaagagaacatgatgctcagattgtgcagattgcc
acggaagccggtctcagaattgctcctgatcagtggtcatcccttctgtatggagatggt
gcccacaaatcacatatgcaatccatcattgataagctacaaacgccgcaatcgtttctt
cagtccgtgcaggaactcataatcgcccttcagagaacaggagatccgggaaatttggga
caacttcgcccccatttggattttctagccgctctcgatcccaatcctgagagcgataat
cccgattgggaaacgctgaattcctcgctctgttcagtgtatgaagtcgttcaagggctt
caagcattcattgagcaacaaacccagtcgaggaaaggaagtgacggcctaaacgccaat
ccatcggccccaaatgccagatataagacaagtatgtgccgagacctgacctcgcatggc
tcttgtcctcgaggaaagaattgcacgttcgctcactcccaatctgaaatggagcaattc
agaaccagtcgcaagcccaagtttgttggtaaacctccacctgtggtgggttccgtgccg
cctattgtgaacagtgcaagagggccggtactcggtgccaaaaaggaccccatgggaatg
ggctccccccttaccattcctccggtagctcaggtggcaccacttcagaggggctttgtt
gctcccacgcacttatcaaccccggtggagcctactattggccatggaatggctcaagtc
atgcccatggatgaagcctacgtgaacgaggtcttgcactccaacccgggacctatcgga
agttttccatcccgtgatggggttggaatgacctccaatgagcatggagagtctgcgtac
catcaaactcacacggtgatgtccgtccaacctatgaccggtggaaatctaataaaaggt
tccgagcatgattcaaattttgacagatatcctctccgttgcgagagtcgaaactcacat
ttggatataccggaaatgaccatggccaccaagagcttgggtgctttgaagagccgaaaa
gaggaaatcatcgactatttggaggatcttgttggcaaagaagagacccagacgatcaca
aagaaagcttcaataacaattggcaatggtaacgggccctcttcctcgcaatctccttct
tctttgacagttgagaaaccccaattgaggcaaagtaaatcggccccatctcaaagcaat
tactcgatttggacatctcgatccattgcgactttgccctctccatgtgaaaatactcaa
agtgaaggcaaggtggctaccgtggctccaaatttcatcgaagatattgcggctgacgtt
tgtacctcaccgtccgagtttgatctaatggaagacggggaaaaagttcccatgggggag
gtcaatattgacacgtggcacgtgggtaaatcttgcttggacgaggatgaggaaatgatt
ccattttcggacacccctcaaatttgtcgcttcggacccatttctcgcaagactggcact
ctcctccagctagcctctccttctcaaactcaggccctcatgaatgacgaacccacgccc
acagccgtggtgagacactctaagcagctcacgcgacaagtaccctccttggcatcgctg
tatcaccagaatggtacccgcaccaccttgcaacccgtggccatcggagccaatggcgag
atcagttatgttgccgtcccggagagctcctatccaaccaccgatgtgacccttcaacaa
attcagcacaattcggcccttctctcgaacgttgccccggcttctcaacagagtctcttt
gccgaatctgagcgaatgaagcatgagttggagatgttgcagaagaagatatccgatctg
aatatggctcacattgaacgccaatcgacgggatccgatccaaactcccgttatggggtg
tcttctgagagagacgatttaacgcgcgagcttcaaatgatcgaatcgaccattcgcgat
cgtgagttggagatttcggccaacagacttcgtattgagacaggagagaatactattatc
cccttgtcttcgtcatttggagcattcgctgcttcacatgggatggttcattatgacgaa
tcgggcggagtaagctcaccatgcacctcttcagcctaa

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