Tigriopus californicus (tidepool copepod): 131887759
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Entry
131887759 CDS
T09700
Name
(RefSeq) parafibromin-like
KO
K15175
parafibromin
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131887759
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
131887759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC73_N
CDC73_C
Motif
Other DBs
NCBI-GeneID:
131887759
NCBI-ProteinID:
XP_059092417
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All DBs
Position
10:7504966..7507484
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AA seq
546 aa
AA seq
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MADPLTLLRQYHTSGRTEEILEADSHIIFGDLAWPKDVRTNFKIYGSESDGKRDYYTLEC
LLYFLKNIKRSHPDYVKQAKGEVPIVHRPDRRDLIQYLEGNLQKKDLKSLDQSAPLQMPI
NFKRSAREELRKSDTSFGGSAAKKPRLEHNQSEIKERLAAKLDGPQESKLSINKANLKNL
SEDLTTDKIAEIRAKLISNRRTRIKPEDDDAKQTSLGLGDLEVNRESRDIFGRERVWRTR
TTVLQSTGKNFSKTVTALLSSVKAREEGKMGKPHPPQAPPSVTPRPGGSMPPPQRQSLPN
YNRYDQEQFRGKDDTHGFNIETMGTFSGMTLKSVTEGSQANRHKQNKGGPPTKPSGPTPA
ASGPNAKPGVGSASPGHSGKRPSRTPIIIIPAAPKSLITMFNAKDILQDLRFVSTEDRKA
QGGKRDNELLIQRRKEGGLTVPYRVIDNPSKLTNADWDRVVAVFVMGQAWQFKGWPWEGV
PVVIFSKIAAFHVKWDESTLEKNIGNWAVNVIQLSREKRHLDRAKLMSFWETLDKYMVKN
KPHLRF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcccctgaccttgcttcgtcagtatcacacctcgggccggaccgaagagatc
ctcgaggccgacagtcatatcatctttggcgatttggcctggcccaaggatgtgcgcacc
aatttcaagatctacggatcggagagtgacggcaaacgggattattacactttggaatgt
ctgttatacttcctgaagaacatcaagcgctcccatccggattatgtcaagcaggccaaa
ggcgaggtgcccattgtgcatcgcccggatcgccgagacctcatccagtacttggagggc
aatctgcaaaagaaggatctcaagtccttggatcagtcggctcctttacaaatgcccatc
aatttcaagcgatcggcgcgagaagagctgcgcaagagtgacacgtcttttggtgggagt
gcggctaagaaaccgcgattggagcacaatcaatccgagatcaaagagcgtttggccgcc
aaattggacggacctcaagagagcaagttgtccatcaacaaagccaatttaaagaacttg
tctgaggacttgactaccgacaagatcgccgagatccgcgccaagctcatctccaatcga
agaactcgcatcaaacccgaggacgatgatgccaaacagactagtttgggattgggagat
ttagaagtgaatcgagagtctcgggacatttttggacgtgagcgcgtttggcgaactaga
actaccgtcctgcagagtacgggcaagaatttctccaagaccgtgactgcgttgctgtcc
tccgtcaaagctcgtgaagaaggcaaaatgggcaagccacatccacctcaagccccgccc
agtgtcacacctcgtcccggaggaagtatgcctccaccccaacggcagtccctacccaac
tacaatcggtacgatcaggaacagttccgtgggaaagacgacacgcacggtttcaacatt
gagaccatgggcacgttttcgggcatgactctcaagagtgtaacggaaggcagtcaagcc
aaccgccataaacagaacaaaggaggacctcctactaaaccatcaggtcctacacccgcg
gcttcgggaccgaatgctaagcctggcgtaggatccgcgtctcctggacacagcggaaaa
cgtccatcgcgaacccctatcatcattattcccgccgctccgaagtcgctgatcaccatg
ttcaacgctaaggacattcttcaagaccttcgattcgtgtcgacggaagaccgaaaagcc
caaggcggcaaaagagacaatgaattgctcattcagagacgcaaagaaggcggactcacc
gtgccgtatcgggtgattgataacccaagtaagctcactaatgccgattgggatcgtgtc
gtggcggttttcgtcatgggacaagcctggcaattcaaaggatggccctgggaaggtgtc
ccagtggttatattttccaagattgcagccttccatgttaaatgggacgagagtacctta
gaaaagaacatcggcaattgggccgtcaacgttatccagctttcgcgagagaagcgtcat
ctggatcgagccaaattaatgtccttttgggagacattagacaagtacatggtgaaaaat
aagcctcacttacgattctga
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