Tigriopus californicus (tidepool copepod): 131887870
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Entry
131887870 CDS
T09700
Name
(RefSeq) far upstream element-binding protein 2-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131887870
03041 Spliceosome [BR:
tcf03041
]
131887870
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
131887870
Spliceosome [BR:
tcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131887870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
FUBP_C
KH_Vigilin
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
131887870
NCBI-ProteinID:
XP_059092569
LinkDB
All DBs
Position
10:14354001..14358492
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AA seq
566 aa
AA seq
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MSEFSSASAPNSASSSSSLSGSNPSNPLALATALERAKQLASKIKAPVVGGDSLSSSSVV
AAAPLKRSFDSLSGGEEPLSKRPGIMDMNAMPGGMMAANGVPGGMMAPGGAGGVEAPATE
IIMVPDKMVGLIIGRGGEQITRLQAEYGCKIQMAQDSAGQPDRQCTLTGAAVNISQARAA
IERIVANEGNGPPRGAGGPGGPGAAPGGGFFEMMVPGHKVGLIIGKGGESIKQLQEQSGA
KIVIIQDTPEAAMEKPLRITGSPEAVERAKQLVTEILNQGDERDMGFGGRGRGRGSSMMR
GMGGAGTGGRGGFGMPRGRGGPRGGMTGGQWGAPSSEYGGQATEYVQVPSNKCGLVIGKG
GETIKNINQSTGAHCEIDKHSAPDAREKTFVIRGSPEAVERAKSMVLEKLGMQGGYGGGA
GGYGGGGGAGGSWGGGSSYGGGYDGGAGGVNPQTGQADFSAQWAEYYRTMGMVKEAEAIE
ASRANASAPAAPAAAAAPGNGAQNGSQDYSAQWAEYYRSIGKLKEAEAIEAQMKQKVGSA
PSGTPSYPTQYATASTGYYGGNYVSQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattctcgtcggcttctgctcctaattctgcttcgtcgtcttcatccctctcc
ggttcgaatcccagtaatcctttggccttggccaccgctctcgaacgagccaagcagctt
gcgtccaaaatcaaagcccccgtggtcggtggggatagcctgagtagcagttccgtggtc
gcggcggcgcctttgaaacgctcgttcgattctttgtccggcggtgaagagcccctaagt
aaacgtcccggcatcatggatatgaatgccatgcccggtggcatgatggcggccaatggc
gtgcctggcggtatgatggcgcccggtggagcgggtggcgtcgaagcgcccgccaccgag
atcatcatggttcccgataagatggtcggactcatcattgggcgcggtggcgagcaaatc
acccggcttcaggccgagtacggctgtaagatccagatggcccaagacagcgccggccag
cccgaccgacagtgcactctgaccggagccgcggtcaacatttcgcaagcccgagccgcc
attgagcgcatcgtagccaacgagggcaacggaccgccgcgcggagccggcggacccggt
ggtcccggtgccgcgcctggaggcggctttttcgagatgatggtcccgggacacaaggtg
ggactgattattggtaagggcggcgagtctatcaagcaactccaagaacagtcgggcgcc
aagatcgtcatcatccaagacacccctgaggcggccatggagaagcccctgaggattacg
ggctcacccgaagccgtggaacgggccaaacagctggtcaccgaaatcctcaaccaaggg
gatgagcgggacatgggcttcggaggacgaggtcgcggacgtggtagtagtatgatgcgt
ggcatgggcggcgccggaactggcgggcgtggggggttcggcatgccccgcggtcgcggt
ggacctcgtggtggcatgactgggggtcaatggggcgcgcccagtagcgagtatggcggc
caagccacggaatatgtgcaagtaccgtccaataagtgcggactcgtcatcggcaaaggt
ggcgaaaccatcaagaacatcaatcagagcaccggcgcccattgcgaaatcgacaagcac
tctgcccctgatgctcgcgagaagactttcgtcatccgaggctcgcccgaggctgtggaa
cgagccaagagcatggttttggaaaagctcggcatgcaaggcggatatggaggcggggcc
ggaggttatggtggtggtggtggagccggtggttcatggggaggtggctccagctacggc
ggaggctacgatggcggagccggtggggtcaaccctcagacgggtcaagccgacttctcc
gctcagtgggccgagtactaccggaccatggggatggtcaaagaagccgaagccattgag
gcctctcgcgccaatgcttcagcccccgctgctcccgcggccgctgctgcccccggcaac
ggcgcacagaatggatcccaagactattccgcccaatgggccgaatactacagatcaatt
ggcaagttgaaggaggccgaagctattgaggcacaaatgaagcaaaaggttggttccgct
ccatctggaactccatcatatcctactcaatacgccacggcgtcaactggatattacgga
ggcaattatgtatctcaatag
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