Tigriopus californicus (tidepool copepod): 131887890
Help
Entry
131887890 CDS
T09700
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcf03009
]
131887890
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
90S particles
Other 90S particles
131887890
Pre-60S particles
Other pre-60S particles
131887890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
mTOR_dom
TPR_Trm732_C
EST1_DNA_bind
Motif
Other DBs
NCBI-GeneID:
131887890
NCBI-ProteinID:
XP_059092600
LinkDB
All DBs
Position
10:complement(7491908..7495793)
Genome browser
AA seq
1151 aa
AA seq
DB search
MGKFRVRSKSAKKGQRWARGQSGQSNPVKHRHRDAAKSRSWGGTSASGRSAANDSPWAAG
PGKLTAESLLKHDALSGDAVMSSMPIDDDDAVSLGQTAKTFETFASDWTQCSHQSFHRLM
RRFNANNPQHKEMLAILAAITELIKEKGGEESSTEYFAALLATLESTDTLEALSAVLTLV
SMVIKTVPAEVLQAKFGVVSKLLLDLLAQQSEAGQSTSVVRALIGCLSVLLRAQSLFTWK
QSSTHQVYHSVMAFITHPKPKVRKAGQRAITSILRGSWIMTQTNAPSFHPMIGATMKECQ
SNLNLNTEIKSVMYTLALMKEIIGVAPQSQVKASCDLVLSLLQSKAHPNINTCGMQMLYG
LFETRPNPSVLSSDLNARLVTAIYDFKPSVNDAQPFISWLTVLQEGLLNLNQLDPNLCWA
HLPKFYTEAKKGWEADLKHVNVAATTAMKAIAIECIKPQAAVMATQANMTEVFVKIFAQI
KDGFSYQYHASYSQVLHLLSIVFDVAGEEFPAITGAILPELAERRNSENFAFTNELDYVV
GKAVRKLGPKMVLSFIDLQIKGDDNPRSGFPRSWLLVVMRGNIQNTELGFFIDYFYPLAE
KCRLRSHRCLNQDDRFGHKIFQMLELQMWDLLPGFCNGARDLEESFKVIARVLGEQLKVR
KELRMNIMASLRQIILKTADKEEDRLTIARYAKNYLPILCNIYTTPSVGSEEADQRLATF
ETIKQFLRIAPSDLIYSMFDSTFELYQSESGFMREATLDLLRAELCYQDIPRIQKLFDAV
VGNLASTDHTQQKKAYRVLEEICGSSSESCSEFISLNLESIQAVFLKSLSNASPTSRASR
LSSLTHIARKLKVEQIPFLYQVIPECVLCIKATNEKARANAFNLILVIAEILLRLKSEGS
DVVIREYMEVLVAGLAGSASLIHCTMLAISRVFYEFKDMFPESVADWLAEKVCLLLTNRE
REVVGSALSFLQVFVQVNPVAQTTKHVPQIITSLITMTEDCKRCYRLKTRYLLDRIVRKF
GYDFVLSMVPKDDVLTLNRLKNIRKKQMQQKRRKDGAEPGESDDDDDDLEFNIKSKSKTM
EDILQDSDSDLEDTMDTDSEARSAKRNKKKKTKGASVAFITDNDEGIVDFLDPSAAQKVS
SVRPKTNAERD
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatttcgcgtacgctccaagagcgccaagaaaggacaacgttgggctcgcggt
caaagtggtcaatctaatccggtcaaacatcgacatcgtgatgcggctaaatcgcgatcg
tggggtggaacctcagcgtcgggccgttccgccgccaatgactcgccgtgggcggccgga
ccgggcaaattgacggccgagtcgttgctcaaacacgacgcgctctcgggcgatgcggtc
atgagctcgatgcccatcgatgatgatgatgcagtttccttgggccaaacggccaagact
ttcgagaccttcgcctcggattggacccagtgctcgcatcaaagctttcatcgactcatg
cgacgattcaacgccaacaatcctcagcacaaggaaatgttggccattttagccgctatc
accgagctcatcaaggaaaaaggcggagaggaaagctccaccgaatactttgccgcatta
ctcgccacgcttgaaagtacggacacgctcgaggcactatccgccgttctgactctggtg
tccatggtgatcaaaaccgtacccgcagaggtgctccaagcgaagtttggtgtggtatct
aagctcttgctggaccttttggcccaacaatccgaagccggtcaatccacctcggttgtt
cgggccttgattggatgcttatccgtgcttttgcgcgctcaaagtctatttacctggaaa
cagagctccactcatcaggtgtatcattcggtgatggccttcatcacccatcctaaacct
aaggtgcgaaaggccggtcagcgggccatcacctcgattttgcgtggcagttggatcatg
actcaaactaatgctccttcgttccatcccatgatcggggccaccatgaaagaatgccag
tccaatctgaacttaaacaccgaaatcaaatccgtgatgtacacgctcgccctcatgaag
gagatcatcggcgtggctccccaaagccaagttaaggctagttgcgatctggtcttgtcc
ctattgcaatctaaggctcatcctaacattaacacctgtggtatgcaaatgctttacggg
ctttttgagacccgtcccaatccttcggtcctatcctccgacttgaacgctcggttggtc
acggccatctatgacttcaagccctcagtgaacgacgcccaacccttcatctcgtggctg
actgttctacaagagggtctcctcaatctgaatcaactggatcccaatctgtgttgggct
cacctacccaaattttacaccgaggctaagaaaggctgggaagcggatctgaaacacgtt
aatgtggctgctaccaccgccatgaaagccattgccattgagtgcatcaaaccacaggct
gcggtcatggccacccaagctaatatgactgaggtgttcgttaagattttcgctcaaatc
aaggatggttttagctaccaatatcatgccagttattcccaggttctgcatttgttgtca
attgtgttcgatgtagcaggcgaagaattcccggccatcacgggcgccattcttcctgaa
ttggctgaaagacgaaactctgagaatttcgccttcacaaacgagcttgattacgtcgtg
ggcaaagctgtgagaaagttgggcccgaaaatggtcctctcgttcatagacttgcagatc
aagggtgatgataacccccgaagcgggtttcctcggagttggcttctggtcgtgatgcga
ggcaacattcaaaacacagagttgggatttttcattgactatttttacccgttggccgaa
aaatgtcgactccgctctcatcgttgcttaaaccaagacgaccgatttggtcataagatc
ttccaaatgctggagttgcagatgtgggatcttctcccgggattctgcaatggagccagg
gatctcgaggagagcttcaaagttatcgcccgagttctgggagagcagctcaaggtcaga
aaagagttgcgcatgaatatcatggcctcacttcgacaaatcatcctgaagaccgctgac
aaggaggaggatcgtctaaccatagctcgatatgccaagaattacttgcctattctgtgc
aacatctacaccacgccatcggtgggctcagaagaagctgaccaacgattagctactttc
gaaaccatcaagcaattccttcggattgctccgtccgacctgatttactccatgtttgat
agcaccttcgagttgtaccagagtgaaagcggattcatgagagaggccaccttggatttg
ttgagagccgagctgtgctatcaagatattccccgtattcaaaagctctttgacgctgtt
gttggcaatttggcgagtaccgatcacacccaacaaaagaaggcgtatcgtgttttagag
gagatctgtggctccagcagtgagtcctgttcagagttcatctcgcttaatttggaaagc
atccaagcggtgttccttaaatctctttccaatgccagtccaacgagtcgagcctctcgt
ctctccagtttgacacacattgcccgcaaattgaaagtggagcaaatcccgtttctttac
caagtgattcctgagtgcgttctctgcatcaaagctaccaacgagaaagccagagccaat
gccttcaacttaatcttggttatcgccgagattttgctacgcctcaaatctgaagggagc
gatgtggtaatcagagagtatatggaggttctagtggccggcttagctggatcggcatcc
ttgattcattgcaccatgttggctatctctcgagtgttttatgaattcaaagacatgttc
ccggagagtgtggctgattggttggccgaaaaagtgtgcctacttcttaccaacagagag
cgtgaggtggttggttcggctttaagtttccttcaagtgtttgttcaagtcaaccctgtg
gctcaaaccacgaaacatgtgcctcagatcatcacctctctgattacgatgaccgaagat
tgcaagcgatgctaccgattgaagaccagataccttctggataggattgtgcgcaagttt
ggttacgatttcgtccttagtatggtccctaaagatgatgtcctcactctgaatcgatta
aagaacataagaaagaaacagatgcagcagaaacgacgaaaggatggtgcagaacccgga
gagagcgatgatgacgacgacgatctagaattcaacatcaaatctaaatccaagaccatg
gaagatattctccaagattcggattcagatttggaagacaccatggacacggattctgag
gcgagaagtgctaagaggaataagaagaagaagaccaaaggtgccagtgtggcttttatc
accgacaatgacgaaggtatcgtggacttcttagacccgtctgcagctcaaaaggtgtcg
tccgtccgccccaaaacgaacgctgagcgagactag
DBGET
integrated database retrieval system
