Tigriopus californicus (tidepool copepod): 131887942
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Entry
131887942 CDS
T09700
Name
(RefSeq) WD repeat-containing protein 46-like
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcf03009
]
131887942
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
131887942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
B-prop_COPA_B_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_Nup120_160
KNTC1_N
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
131887942
NCBI-ProteinID:
XP_059092663
LinkDB
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Position
10:complement(5994260..5996916)
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AA seq
615 aa
AA seq
DB search
MCQCQNPSTSSMSIDVGSTGKMRYFTKSQTPSSESGGSKSENIFIMGANEMKNARNVQNK
LRKKANRVRDVSGLKGTRSGRVAPREHFRSRKRRKGDKGPDPFPGPVPLDPKVLAKYSNG
PGVTRNKVKTKFRQKEVERREKQIEFAETLAGKAELLLDEDVGVLEGDEIQEFTPTITQT
QIQQNVDDISATKGFDLNLPQFGPYKADYTKNGRYLVIGGRRGHVAAFDWTSKNLTCEIN
VQESVHDVKWLHTENMFAVAQKKWTYIYDNQGIELHCLKRLDNVLKLEFLPYHFLLAAGS
ESGFLSWVDISLGKLVTQYNAKLGPMGVMCQNPSNAILCAGHGKGIVTMWSPNMREPVAK
MLAHRQAVRGVAVDLTGTYLATAGTDRSLKIWDVRQFKCLQNYRISAGASQLEFSGRGLL
GVAMGNTVEIFKDCCTTAVKYPYMRHRAFKRITDIHFAPYEDAMGIGHEAGFTSILVPGS
GDPNFDALEVNPYQTKRQRREAEVKALLEKIPSELISLDPTQLGDVDVKTFEEKIAEKNS
KLHLKPEKIDFEPRYKMKGKGGTAKRFHIKRTVRGEIKMRDLNQKLEEVAQEEQVSRVGK
PKQEKKPKSLLDRLK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcaatgccaaaatccgagtacaagtagcatgtccattgacgtcggctccacggga
aagatgaggtattttaccaagtctcagaccccatcttcagaaagtggaggttctaaatcc
gagaatattttcataatgggagctaacgagatgaagaacgcccgaaatgtgcagaacaaa
cttcgcaaaaaagctaatcgggttcgggatgtgtcaggattgaaaggcacccgatccgga
cgcgtggcgcccagagagcattttagaagtcgaaagcgccgaaagggcgacaaggggcca
gatcctttccccggcccggtccccttggaccccaaagtattggccaagtactccaatgga
cccggcgttactcgaaacaaggtgaaaactaaattccgtcaaaaagaagtggaacgccgg
gagaagcaaatcgaatttgccgagactttggccggaaaagccgagttgcttttagatgag
gatgttggcgtcttggaaggtgatgagatccaggagttcacgcccaccattactcaaaca
cagattcagcaaaatgtggacgatatatcggctaccaagggctttgacctcaatcttcct
cagtttggtccatacaaggcggattacacgaagaatgggcggtatctggtcattgggggt
cgtcgaggtcacgtagcagccttcgattggacttccaaaaatctgacgtgtgagatcaac
gtgcaagagtccgtgcacgatgttaaatggttacatacggaaaatatgtttgccgtggct
caaaagaaatggacttacatctatgataaccagggaatcgaattgcattgtctaaagaga
ctagacaatgtcttgaaactggaattccttccgtatcattttcttttggcggccgggagt
gaatccggctttctcagttgggtagacatatccttgggcaaattagtgacccaatacaac
gccaaactgggccccatgggtgtcatgtgccagaatccgagtaacgccattctttgcgcc
ggtcacggtaaaggtattgtcaccatgtggagcccaaatatgcgggagcccgtggccaaa
atgctggcccatcgtcaagccgttcggggcgtggctgtggatcttacgggcacctacttg
gctacggcaggcacggatcgaagcctcaagatttgggatgtgcgtcaattcaagtgcttg
caaaactaccgaatttccgctggcgcctcacagttagaattcagcgggcgaggattgttg
ggcgtggctatgggtaacacggtggagatcttcaaggattgttgcacaaccgcagtcaaa
tacccatacatgcgacatcgagccttcaaacgcatcaccgatatccattttgctccttac
gaagacgccatgggcattggacacgaggccggtttcacgagtattctggttcccggcagt
ggtgatccgaatttcgatgctctggaagttaatccttatcagacgaagcgtcaacggcga
gaagcggaagtcaaggctctgttggagaagatcccatcagaactgatcagtttggacccc
actcaattgggcgatgtggacgtgaagactttcgaggagaagatcgccgagaagaatagc
aagctgcatcttaaacctgagaagatcgatttcgaacctcgctacaagatgaaggggaaa
ggtggaaccgccaaacggttccacatcaaacgaaccgtgaggggggaaatcaaaatgcga
gacctaaaccaaaaactcgaagaagtcgcacaagaagagcaagtttcaagggtaggaaag
ccaaaacaagagaaaaagcccaagagtcttttggatcgtctaaaataa
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