Tigriopus californicus (tidepool copepod): 131887966
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Entry
131887966 CDS
T09700
Name
(RefSeq) NF-kappa-B inhibitor cactus-like
KO
K04734
NF-kappa-B inhibitor alpha
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
131887966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131887966
04131 Membrane trafficking [BR:
tcf04131
]
131887966
Transcription factors [BR:
tcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
131887966
Membrane trafficking [BR:
tcf04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
131887966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
131887966
NCBI-ProteinID:
XP_059092700
LinkDB
All DBs
Position
10:14281354..14282971
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AA seq
350 aa
AA seq
DB search
MSKGKTVGSDQAQALTDSGAQDIMLFQSSSNPECDNDETPVIQMPNATGTGSNSERDMYR
QTLYDSGLCSELGQLSLSSSDSLTPAKLQEYYEPDEDGDVQLHLAIASGFTDVAMALIKM
APHPDYLSIPNKALYSPLHIAVLQDQPLVVRRLVIAGARIDFRDSEGNSPLHLAARRGNL
ACAEALLKPVAVHEMEEAGLPPSLFTALPADVIEQSNNVGEQCVHLATMGGHSDFLRFLC
WHNADMNAPDGRGGRAPLHFAVGARQLPLIECLIDQRPHGCGVNANQLDWYGRTPYQLAV
LNGSVEIANYISQRVTGCTLPEADTDAEESEIEYNQIRRNDSNLLLNSSA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaggaaagacggtcggttcagatcaagcccaagcgttgaccgattcaggtgcg
caagacatcatgttgttccaatcttcgtccaatccagagtgcgacaacgacgagacgccc
gtgattcaaatgcccaatgccacgggtacgggtagtaacagtgagcgggacatgtaccga
cagacactttatgacagtggtctgtgttcagaattgggacaactcagccttagttcatcg
gactcgctgacccctgctaaacttcaagaatactatgaacctgatgaagatggcgatgtg
cagcttcatttggccatcgcctcggggtttacggatgtggccatggccctgatcaagatg
gcacctcatcccgattatctatccataccaaataaagccctatattccccgctccacatt
gcggtccttcaagaccagcccttggttgtgcgccgtctagttattgcaggggctcgaatt
gactttcgtgacagtgaaggaaacagcccattacacttggcggcacgccgcggcaacttg
gcatgtgccgaagccttattgaagcccgtagccgtgcacgagatggaggaagctggtctt
ccgccatcccttttcacggccttgcccgccgatgtcatcgaacaatccaataatgtgggg
gaacaatgtgttcacctggctaccatggggggtcattccgattttttacgctttctgtgt
tggcacaatgccgacatgaacgctcctgacgggcgcggtgggcgggcccctcttcacttc
gcggtaggagccaggcaactgcccctcattgagtgcctcatcgatcaacggccccacggt
tgcggtgtcaatgccaaccagctggattggtacggtcgaactccttaccaactggccgtc
ctgaatgggtccgtcgagatcgccaattatatcagccaaagggtgacaggatgcaccctg
cctgaagccgacactgacgcagaagagagtgagatcgagtataatcaaatccggagaaac
gactccaatcttcttctcaactccagcgcttaa
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