Tigriopus californicus (tidepool copepod): 131887982
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Entry
131887982 CDS
T09700
Name
(RefSeq) choline transporter-like protein 4
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131887982
04147 Exosome [BR:
tcf04147
]
131887982
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
131887982
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
131887982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
Trp_oprn_chp
Motif
Other DBs
NCBI-GeneID:
131887982
NCBI-ProteinID:
XP_059092718
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Position
10:4021280..4029484
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AA seq
730 aa
AA seq
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MGSSNKVEDFRSDESQYGRKHEHDEDFHGPINKRSCTDVICLLLFLVFLGAWIAVAVYAF
ANGNPQRLIYPSNSDGEICGRGNYTESPKLLFFDLSRCARLSSVTGCPTPQVCVKECPND
FGRPWAEINDAGNSQTDVKRKMFPFCGPKMAESQITDDSITVKELILQKICPPWWVPSKT
LLGRCIPSFQTTEDNQPMTNETVIIDSNETPENEIVDGGVLKKAVNYIGKLIDVRSFGER
IYSDLATTWWMIILALILATILSLVWIILMRFVAAVMVWTSLILSVLLLCVGIVYCYFRY
SQLKDDPSPDDSWLNEGFSSNLSVYSELSTTWLVLLIILAVVLLIVLIILIFLRKRIKLA
IELIEEGSIAVGHMMSTLIFPVVPFFCDLVVIAWFVLLAAFLASVGEQSFMLNISNCKDP
SAVSNYPRSGYKCDGEIPPENVTILCPEARCDFFKYGTTPMANYLQIFNVFGLLWGLFFV
SAMEEMVMAGAFAAWYWTFDKKNLPSAPLTRSFGRTFRYHLGTLAFGSLIIAIIRMIRLV
IEFIEQKMKEHRQDNPLVKAILCMCRCCFWCLETFMKFINRNAYIMTAIYGRNFCWSAKE
AFSLLMRNIARVAVLDKITDFLLLLGKLVIVGTMGVLSFYIFSGRIDKIQVEDLNYYFVP
VFVIIVGSFFIADVFFDVYEMAVDTLFLCFLEDIERNDGSADKPYYMSKDLRKILNYVKD
NSRPPTAKSE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgggatcctcaaacaaagtcgaggactttcgaagtgatgaatctcaatacggacgcaaa
cacgagcacgacgaggatttccatggacccattaacaagcgatcttgcacggacgtgatc
tgtctcttacttttcttggtctttttgggagcttggattgcagtggccgtttacgctttt
gccaatggaaaccctcaaaggctcatttatccgtctaattctgatggagagatatgtggg
cgcggcaattacactgagagccccaagctgttgttctttgacttgtctcgatgtgccaga
ctctcgtccgtaaccggatgtcctactcctcaggtgtgcgttaaggaatgtccgaacgat
tttggcaggccttgggcggaaatcaatgacgctggaaattcacaaacggatgttaagcgc
aaaatgttcccattttgtggaccaaagatggccgagtctcaaattacggatgacagcatc
acggtcaaagagctcattcttcagaagatctgccctccctggtgggttccatccaaaact
ctcttgggccgttgcatacccagctttcagaccacagaggataatcagcccatgacaaat
gagaccgtcatcattgattccaacgagaccccagagaacgagatcgtggatggtggagtt
ttgaagaaggctgtgaactatattggcaaattaatcgatgtgcgatcgttcggagagaga
atctacagtgatctggccaccacgtggtggatgatcatattggcattgattctcgctaca
attttatctttggtctggatcattctcatgagattcgtggctgccgtcatggtttggacc
tcgttgattttgtcggtcctacttctgtgtgtgggaatcgtttattgctatttccgctat
tctcagctcaaggacgatccaagtccagatgattcgtggctgaacgaagggttttcgtcc
aatctcagtgtctattccgagttatctaccacgtggctcgttctcctaataatattggca
gtggtcctcctcattgtcttgatcattcttatattcttgaggaagagaatcaaattggcc
attgaactcattgaggaaggatctattgccgttggacacatgatgtccacactcattttc
ccagttgttccgttcttttgtgatttggtggtgatcgcttggttcgttctcttggccgcc
tttttggcctccgttggagaacaaagctttatgttaaacatttccaactgcaaagaccca
agtgccgtgtccaactatcctagaagtggctacaagtgtgacggcgagatccctcccgaa
aatgtgaccattttgtgtcccgaggctcgttgcgatttcttcaaatatggaaccacacca
atggcaaactatcttcagatttttaatgtattcggccttctatggggtcttttctttgtg
tcagccatggaggagatggtcatggctggagcctttgccgcttggtattggacctttgac
aagaagaatttgccctctgctcctttgacgaggagttttggccgaacttttcgatatcat
ttgggtacactagcctttggttcgttgataattgccataattcgcatgatcagattggtg
atcgaatttatcgagcagaaaatgaaggagcaccgccaagacaaccctttggtcaaggca
attttgtgcatgtgtcggtgttgcttttggtgcctggaaaccttcatgaaattcatcaac
agaaatgcatacattatgacagcaatctacgggcggaacttttgttggtctgccaaagaa
gcgttttcccttctcatgagaaacattgcgagggttgcggtcttagataaaatcacagat
ttcttacttcttctgggaaaactggtcattgttggcaccatgggggtgttgtcattttac
atttttagtggccggattgacaagatccaagtggaggatctcaactactattttgtgcca
gtgtttgtcatcatagtgggatcattcttcattgccgacgtattcttcgacgtctacgaa
atggctgtagacacgctgttcctttgttttctcgaggacattgagaggaatgatggatcc
gctgataagccttattacatgtctaaagatctcagaaagatattgaattatgtcaaggac
aattctcgtccgcccacggctaaatcagaatga
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