Tigriopus californicus (tidepool copepod): 131888025
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Entry
131888025 CDS
T09700
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03013
Nucleocytoplasmic transport
tcf03015
mRNA surveillance pathway
tcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131888025
09122 Translation
03013 Nucleocytoplasmic transport
131888025
03015 mRNA surveillance pathway
131888025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131888025
03041 Spliceosome [BR:
tcf03041
]
131888025
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131888025
Spliceosome [BR:
tcf03041
]
Complex C
Other components
EJC/TREX
131888025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
131888025
NCBI-ProteinID:
XP_059092778
LinkDB
All DBs
Position
10:9787747..9788779
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AA seq
146 aa
AA seq
DB search
MNPDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHQAVMDEL
KRVIEDSEIMAEDDALWPQPDRVGRQELEIVIGDEHISFTTSKIGSLVDVNGSKDPDALR
CFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgacttctatttgcgctactacgtgggccacaagggcaaattcgggcacgag
tttctcgagttcgagtttcgaccggacggcaagttgcgctatgccaacaattccaactac
aagaacgataccatgatccgcaaggaggcctacgtccaccaggccgtcatggacgagctg
aaacgcgtgatcgaggactctgaaatcatggccgaagacgacgcgctctggccccaaccc
gaccgcgtgggtcgtcaggaactcgagatagtcatcggcgacgagcacatctcattcacc
acctccaagattggatccctggtcgacgtgaatggcagtaaggacccagacgccctccgt
tgcttctactacttggtgcaggatctgaagtgcctcgtgttttccttgatcggactccat
ttcaagatcaagcccatttaa
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