Tigriopus californicus (tidepool copepod): 131888030
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Entry
131888030 CDS
T09700
Name
(RefSeq) ATP-dependent DNA helicase Q5-like
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcf03400
]
131888030
Enzymes [BR:
tcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131888030
DNA repair and recombination proteins [BR:
tcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
131888030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
SRI
ResIII
ATPgrasp_Ter
Motif
Other DBs
NCBI-GeneID:
131888030
NCBI-ProteinID:
XP_059092791
LinkDB
All DBs
Position
10:complement(5864850..5868458)
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AA seq
1070 aa
AA seq
DB search
MSKVEALETLKAHFGHESFRSSDQEKAVLAVLAGQKDVFVSMPTGSGKSLIYQLPAVMAG
PKKVSIVVSPLIALIKDQMEHLAKNKIQAETINSKMGEKDRKRVLADLSCKAPNTQLLYV
TPEQCATGTFKGVLERLVKYDKLAYFVIDEAHCVSQWGHDFRPDYLKLGLLKSQTGKQCP
WIALTATASTTVVEDILKQLKLKRVQKFKIPCFRQNLYYDVRFRDAIDDEFEDLKGFVLE
SLGSKWNENRTVRSGCGIIYCRTRDGTEELAHQLQRRGVPCQAYHAGLKDKERNGVQEDW
MSGKMPIITATISFGMGVDKASVRFVVHWCAPQSVAGYYQESGRAGRDGLPSFCRIYYSR
RERDTVSFLMKQDLGKAKTERKKEQVKVSIKSFHTMVKYCEGTSCRHAVFSQFFGDDPPV
CQKRCDVCSNIKQVEKNVEGFSNASLRGSEYRSRPMMITGEPDDSLYEGGKKGSKRSFED
YDGEEDDFDPKAAEARARKERETMIKKEFQARKSKKSRKELVDLERNRTKEEEEAAKYAK
VKAAEFTAKKIAGLEIKARESYLNLLETNLRANYDQFGKFASSDEVSAKPLTLTDISQCA
IQAEYDIFSKNKVITMYRRGMAFLMAEVKKETDSWKLHKCLSQFDPSQASSEGQRLSKFA
EKVSNEMKTNGSEMPNGVFQSALSLSRENDSKSKPNQNQSKEAMVFKSFFTNNQSSTPSG
SNGVSSYEGPLPGGSISRQDSTDSSTKSYSKKTQHVLKTLGFGGSDEEEDPSGVSVEEPT
GLNFYRDTTSSTAHPVSPSDASSSSPEISHLEDKDTLTPNNNETNESSPHSDTKEDLKEV
DPEIEEYQNKLEEILPPPDEGNRGLTWSNWNGYTPEKASKLEDTITKMQRQMAEDNDAME
YEMKLKRKEALDDGREQIPEPNKETVQAEKGKRKESPKKIKVRVETTRSKRPPKSHIPHI
DRAPKKPKISERDPTHQSKIEKRLKIKTADSVVKLLVPYFKQGKIASKEVFKYFAREFTH
VILEVTKEPSSEILTKYVQKFFKSNRDAIILTENEAKLKITKFHDHVRLS
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggtggaggctctggagaccttgaaggcccattttggccatgaaagctttcgc
tcatctgatcaggagaaggctgttctggccgtgctcgccggtcagaaggacgtgtttgtg
tccatgcctacaggatcgggtaaatcgctcatctatcaactcccggccgtcatggcgggt
cccaagaaagtctccatcgtggtgtcgcctcttatcgctctgatcaaggatcagatggaa
cacttggccaagaacaagatccaagccgagaccatcaattccaagatgggcgagaaagat
cggaagcgcgttttggcagatctgtcctgcaaagcgcccaacacgcaattgctttatgtc
acgccagaacaatgtgccacgggcacgttcaagggtgtgttagagcgattggtcaagtat
gacaagttggcctatttcgtgattgatgaggcgcattgcgtgtcccaatggggacatgat
ttccgaccggattacttgaaattaggcttgcttaagagtcaaaccggaaaacaatgtccg
tggatcgctttgactgctacggcctccaccactgtggtggaagatatcttgaagcaactc
aaactgaaacgtgtccagaagttcaagatcccgtgtttcaggcagaacctttactacgac
gtccggtttcgtgacgccattgacgacgagtttgaggatctgaaaggatttgtgctcgaa
agtctagggtctaaatggaatgagaatcgaaccgtacggagtggatgcggaataatctat
tgccgaacccgtgatggcaccgaggagctagctcatcaattgcagcgtcggggcgtgcct
tgtcaagcgtatcacgccggattgaaagacaaggagcgcaacggagtgcaagaagattgg
atgagcggcaagatgcccatcatcaccgccacaatatcgtttggtatgggggtggacaaa
gcctcggttcggtttgtggttcattggtgcgctccccagagtgtggcgggctactatcag
gaatcgggtcgcgcgggtcgggacgggttgccctcgttttgtcggatatactactctcgt
cgagagcgggacaccgtgtctttcttgatgaagcaagacttgggcaaggccaaaaccgaa
cgcaagaaggagcaagtcaaggtgtccatcaagagctttcacaccatggtcaagtattgt
gaaggaacgagctgtcgacacgcagtcttcagtcaattctttggcgatgatcctcctgtt
tgtcagaaacgttgcgatgtatgctcaaatatcaagcaggtcgagaaaaacgtcgaggga
ttctctaacgcctcccttagaggatccgaatatcgaagtcgacccatgatgatcacggga
gagcccgatgacagcctctatgaaggtggcaagaagggttcgaagaggagttttgaagat
tatgacggtgaggaggatgattttgatcccaaagctgcggaagctcgtgccagaaaggaa
cgggagacgatgattaaaaaagagtttcaggccagaaagtccaagaagagccggaaggag
ctggttgacttagagcggaatcgtaccaaggaagaggaggaagcagccaagtatgccaag
gtcaaagcagccgagttcacggccaagaaaattgccggcctcgagatcaaggccagagag
agttacctgaacctcttggagacaaatctacgggcgaattacgatcaattcggcaagttt
gcttcatccgatgaagtctcagccaagcctctaaccttgacggatatcagccaatgtgcc
attcaagccgaatatgatatcttcagcaagaacaaagtcatcaccatgtatcgcagaggc
atggctttcctcatggccgaggtcaagaaagaaacagattcgtggaagctacataaatgc
ttgtcccaatttgatccctcccaagcatcctcagagggccagagactgtccaaatttgcg
gaaaaagtgagtaacgaaatgaaaaccaacggctctgagatgcccaatggcgtttttcag
tcagctctgagtttgagtagagaaaatgactccaaatcaaagcccaaccaaaaccagtca
aaggaggccatggttttcaaatcgttcttcaccaataaccaaagttcgactccgagtgga
agtaacggcgtgtcaagttatgagggacccttacccggagggtcgatatcccgacaggat
tccacagactccagtacgaaatcatacagcaagaaaactcaacatgtgctcaagactttg
ggctttggcggaagtgatgaggaagaagatccatcgggagtctcagttgaggagcccact
gggctcaatttctatcgggataccacctcgtccacagcgcatccggtcagtccttctgat
gcctcgtcctcgtcgccggagatttcccacctcgaagataaagatactctcacgcccaac
aacaatgaaacgaacgagtcttcccctcactcagacaccaaagaagacttgaaggaggtg
gatccagagattgaagagtatcaaaacaagctagaagaaatcttaccccctcccgatgag
ggaaacagaggtctgacttggtccaactggaatggatacactcctgaaaaggcctcaaag
ctagaagacaccataaccaagatgcagcgacagatggccgaagacaatgatgccatggag
tatgagatgaaactgaagcgaaaagaggcccttgatgatggcagagaacagatacctgaa
ccaaacaaggagactgttcaagccgaaaagggcaagcggaaagaatccccgaagaagatc
aaggtgcgtgttgagaccacacgttcaaagcgacctcccaaatcccatatcccccatatt
gaccgagcacccaaaaagccgaaaatctcggaaagagacccaactcatcagagcaagatc
gagaagcgactcaaaatcaaaacggcagacagtgtggtgaagttgttggtgccctatttc
aagcaaggcaagattgcttcgaaggaagtgttcaagtatttcgctcgagagttcacccat
gtgatattagaagtgaccaaagagccctcgtccgagattctgaccaagtatgtgcaaaaa
ttctttaaatcaaatcgtgatgccattattctcaccgaaaacgaggccaagctaaagatc
acaaaatttcacgaccacgtcaggttatcctga
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