Tigriopus californicus (tidepool copepod): 131888039
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Entry
131888039 CDS
T09700
Name
(RefSeq) DNA helicase MCM8-like
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcf03032
]
131888039
03400 DNA repair and recombination proteins [BR:
tcf03400
]
131888039
Enzymes [BR:
tcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131888039
DNA replication proteins [BR:
tcf03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
131888039
DNA repair and recombination proteins [BR:
tcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
131888039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_lid
MCM_OB
Mg_chelatase
AAA_5
AAA_3
AAA_16
Sigma54_activat
PTP_N
RuvB_N
Motif
Other DBs
NCBI-GeneID:
131888039
NCBI-ProteinID:
XP_059092800
LinkDB
All DBs
Position
10:9816507..9820800
Genome browser
AA seq
863 aa
AA seq
DB search
MVGERGARVARGPRGRAGRGFRRGRGFRGKGRGQCPAGAESQPANRSGGWPVRSRGGAVP
SRPGHHDASALMRVPHTGLNDVQIHAHSVVDESVSTGHERVYQAWRIYLPTQEFSPFSPH
LIKLKAAQTFFASDLFHGPTREELYVRKAFSVPLSTWQSDPAVLRDWPEFERDWLEHGEI
VVGILSLARHQMILAELKAEMEVNAQTTGYPIAALPVNFPIIRARFTNVGSLMPLKDLKT
SAFNQTVSIQGTVVRVSHTRPCCTWLAFKCLTCQGVQSVYQPYGKFLEPIRCPGTACRGR
RFSALRSHRQTITVDRQTIRVQEIVQHESGRVPRTIESELTEDLCDCAVPGDVITLTGVV
KNANVMEKGAGKDRFMFQLYLHAVCIQNAKSSRSGRDRSSHAGIEFTLEDYSLVREIHAF
DSQIFKLVVHSLCPSIYGHDLVKAGFILGLFGGTNRNQGDKSALSVRGDPHILVVGDPGL
GKSQMLTSCVSVAPRGVFVTGNTTTSSGLTVTLSKEAGNDFALEAGALVLADQGCCCIDE
FDKMNSQYQALLEAMEQQSISIAKAGVVCSLPARTGVLAAANPVGGHYNKSKTVSENLKL
KPALLSRFDLVFILIDKPNEEMDQFLSEHIMKLHKKQTQPKSNDEWPTLVGPGDAAQLAH
IPEDATLIERLRKNPRETIQPIGHDLLRKYIAYARKYVSPELTSEACRILQDFYVELRQK
YHSSESMPITLRQLESLKRLTEARAKVELREEATEQDARDVVEIMRASMIDTYSDGEGVL
DFSRSLNGSGMSTRGAAKKFVNALQKRANMLRQEIFSVDEMKSILSGCGAQVANFFDFLT
SLNTQGYLLKKSAKSYQLLTVEF
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggttggtgagcgaggagcccgtgtggcccgagggcctcggggacgggctgggcgggga
tttcgccgcggtcgcggttttcggggaaaggggcggggtcaatgcccggccggggctgag
agccagcctgccaatcgctccggtggctggcctgtgcgatcccgtgggggagcggttccc
tcgcgccctggccaccatgatgcgtcagccctgatgcgggtgcctcataccggcctgaac
gacgttcaaatccacgcccattccgtggtggacgagtcggtctccactggccatgagcgc
gtctatcaggcctggcggatctacctccctacgcaagagttttctcccttttcgccgcac
ttgatcaaattaaaagcggcccagacgttcttcgcttcggacttgttccacggacccaca
cgtgaagaactgtacgttcggaaagcgttttcggtgcctctgtccacttggcaaagtgac
cccgcggttctgcgagattggcccgagttcgagcgtgattggctcgagcacggtgagatc
gtggtgggcattttgagtttagcgcgtcatcaaatgattttggcggagctcaaagccgag
atggaagtcaatgctcaaaccaccggttacccgatagccgccctacccgttaatttcccc
atcatacgcgcccggttcaccaacgtgggttcattgatgccgttgaaggacttaaagacg
tctgccttcaatcaaaccgtcagtatccagggtaccgtggtgcgggtttcccacacccga
ccgtgttgcacttggctggcattcaaatgcctcacttgtcagggcgtccaatctgtgtat
caaccgtatggtaaatttctggagcccattcgatgcccgggaacggcgtgtcggggtcgt
cggttttctgccctgcgatcccatcgtcagaccatcaccgtggatcgccaaaccatccga
gtgcaagagatcgtccaacatgagagtggccgcgtgccccggacgatcgaaagtgaactc
accgaggatctgtgtgattgcgccgtccctggcgacgtgataacactcacgggtgtggtc
aaaaatgccaacgttatggaaaagggggccggcaaggatcgattcatgtttcaattgtat
ttgcatgcggtttgcattcaaaatgccaagtcgtcccgaagtgggcgggatcgctcaagt
catgcggggatcgagttcaccttggaagactattcgcttgtacgggaaattcatgccttt
gatagtcaaattttcaagctggtcgtgcattcgctttgtccgtccatatatggacatgat
cttgtaaaagccggattcatcctgggtctctttggcgggacaaatcgtaatcaaggggac
aaatctgccttgtccgtccgtggagatcctcacattctcgtggtgggtgatcctggatta
ggcaaatctcaaatgctcacaagttgtgtgagtgtggctcccaggggcgttttcgtaaca
gggaataccacaacctcctctggcctcactgtcactttgtctaaagaagcgggtaatgat
tttgcgttggaggctggagccttagtcttggcggatcagggctgttgttgcattgatgag
tttgacaagatgaactcgcaatatcaggctcttttggaggccatggagcaacaatccatt
tcgattgccaaggctggggtggtctgctctttacccgctcgaacgggcgtactagcagca
gccaatcccgtaggcgggcattacaacaagtccaaaacggtctcggaaaatttaaaactt
aaaccagcgttgctttcgcgatttgaccttgtcttcatactgatcgacaaacccaacgaa
gaaatggatcagttcttgtcagagcatatcatgaagcttcacaagaaacaaacccagccc
aagtccaacgatgagtggcccactctggttggtccaggggatgcagctcaactagcccac
atccccgaggatgccaccctgattgagagactccggaaaaacccgcgagaaacgatccaa
ccaattggacatgaccttctgaggaagtacatagcctacgcccggaaatatgtgtcgccc
gaactcacgtccgaagcttgtcggattcttcaggacttttacgtcgaacttcgacaaaag
tatcactcttctgagtcgatgccgattactctgcgtcaattggagtccctgaaacgttta
acggaggctcgagctaaggtggaactgcgcgaagaggccactgaacaagatgctcgagac
gtggtggagattatgcgagccagtatgatcgacacttattcagacggtgaaggtgtcctt
gatttttcgagaagtctcaacggctcaggcatgtcgacccgaggagcggctaaaaagttt
gtaaatgccttgcaaaagcgggccaacatgttgcggcaagaaatattttctgtcgacgaa
atgaaatccattctctcagggtgtggagcccaagtggctaatttctttgattttttaacg
tcgttaaacactcaagggtatctgttaaaaaagtcagccaaatcctaccaattgcttaca
gttgagttctaa
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