Tigriopus californicus (tidepool copepod): 131888070
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Entry
131888070 CDS
T09700
Name
(RefSeq) beta-TrCP-like isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04120
Ubiquitin mediated proteolysis
tcf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131888070
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
131888070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131888070
03036 Chromosome and associated proteins [BR:
tcf03036
]
131888070
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131888070
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
131888070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WDR55
Beta-prop_TEP1_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_DCAF12
F-box-like
Motif
Other DBs
NCBI-GeneID:
131888070
NCBI-ProteinID:
XP_059092836
LinkDB
All DBs
Position
10:complement(9531894..9533748)
Genome browser
AA seq
488 aa
AA seq
DB search
MDRSKYSRPQINLTRDDRLMTWNPSLNIYKVNRFHLLELGSQRDKEVRFDLVEQLLQFNM
IHVVENIFGYVGHVSTLDCTRVSRLWYDFLCAHMFKRWAENSLQHDASLKELALKKKWLD
QLATATQEGPNGDPQDNLIYRQICCGIHELREVWRYREPKNKRLHCDSFVLSVAFQGQSL
FCGLNSGVIQLWDLDWNAKKREQEVHEKGVKCLEINDVIFITGSYDCFVKIWSRSKWRQL
NTISLHSDSIWDLKLHMDTFATASLDGTITMSLIDWSTLQDDSLEITMTLQKHVWRLRTL
VDNDLVSSVDFDERLLIAGYEDSRIDVWELAAQELVLTLRGHNGGVTGLQLNGSVIASGS
YDGTVRLWSVSSGHCLRVFIEPDNFVRCVAFLGNYLACGDFSGLLHVWDVRVQVDSEQVQ
VGSYRQFPGHKGHVVSLQIDAQRIVSGSRDKTVLILDFWAKMVDHCKRRKELSDNATSRG
RVSRFLRS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggatcgaagcaagtattcccgtcctcagattaatctaactcgtgacgatcgtttgatg
acatggaatccaagcttgaacatttacaaagtcaatcggttccatctcctggagctcggg
agtcagagggacaaggaagtgcgctttgatttggtggaacagctgttgcaattcaacatg
attcatgtggtggagaatatatttggttatgtgggacatgtttccaccctggattgcacc
agggtgtctcgtttgtggtatgatttcctgtgcgctcacatgttcaaacgctgggctgaa
aacagtctccagcatgacgcatcgctcaaggaactggccttaaaaaagaaatggttggat
caattagcaacagccacgcaagagggtcctaatggcgatccacaggacaatctcatctac
cgacagatttgttgtggcatccacgagttacgtgaagtttggcgatatcgcgagcccaaa
aacaagcggctccattgtgactcatttgtactgagtgtggcctttcaaggccagagtctc
ttttgcggtctcaatagtggtgtgatccagttgtgggatttggactggaacgccaagaaa
cgcgagcaagaggtccatgaaaagggcgtcaaatgtctcgagatcaatgacgtgatcttt
atcaccggaagttatgactgctttgtgaaaatctggtctcgatccaagtggcgacagctc
aacaccatctcactccattcagactctatttgggacctcaagcttcacatggacacgttt
gccacagccagtttggacgggacaatcaccatgtcgctcattgactggagcactttacaa
gacgactccttggagatcaccatgacacttcagaagcacgtatggaggttgagaacgctt
gttgataatgatttggtttcatccgtggactttgacgaacgcctcttgattgcgggctat
gaagactctcggattgatgtttgggaactcgctgcccaggagctcgtgctcacccttcgg
ggtcacaatggtggggtgacgggtcttcagctgaatgggagtgtcatcgcgtccggcagc
tatgatgggaccgtgcgtctttggagtgtttcgtcgggtcactgtcttcgcgttttcatc
gagccggacaacttcgtccgatgcgttgcatttctgggcaactatctggcttgcggcgat
ttcagcggcctccttcacgtctgggatgtccgcgttcaagtggatagcgagcaagtccag
gtgggctcttatcgccagttccctggacacaaaggacacgtggtgtcgctgcaaatcgac
gcccaaaggattgtcagtggaagccgagacaagactgttctcattctggacttctgggcc
aaaatggttgatcattgtaagcggcgaaaagaattgtcagacaacgccacctcaagaggt
cgggtgtcaagatttctaagatcatga
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