Tigriopus californicus (tidepool copepod): 131888188
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Entry
131888188 CDS
T09700
Name
(RefSeq) vacuolar protein sorting-associated protein 37A-like
KO
K12185
ESCRT-I complex subunit VPS37
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131888188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131888188
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131888188
Membrane trafficking [BR:
tcf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
131888188
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131888188
Exosomal proteins of colorectal cancer cells
131888188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
ATG16
UQ_con
DUF6471
Motif
Other DBs
NCBI-GeneID:
131888188
NCBI-ProteinID:
XP_059092966
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All DBs
Position
10:5469844..5471262
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AA seq
338 aa
AA seq
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MAHDSLLIRSMNRSKGLVPRGGANGYPAPDPYRGPSQDPFHRRKQINTLRIFNENVSEIR
PDVQYHVDFRAVNGQAFQLRVFLPPGFPSQRPDMALSPPGSHPWLDQSGQVVGAPGLLNY
SVLSDLGRVVQAIKRELEKNPPKVSTSGPESKTSPEQPLGAVSRVSRPTPVISVIPGLSD
LSPEELTELSESDIALRHFCQTMPNPDLDALNLTLEQTRERIQTLAHDNQNLGQSLQDQK
DRISEAIQPWSKVRDELSAALPECAASRQKVNLPTLVERLAQASVQSEEDSEAMAEKFQA
GDMSVETFMKEFVASRSAYHLRRTKLDKLRTYCRSAKN
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcccatgactccctcctcataaggagcatgaatcgatccaaagggctggtccctcgc
ggcggtgccaacggctaccctgcccccgatccatatcggggacccagtcaggacccgttt
catcgccgcaagcagattaacacgctacgcattttcaatgagaatgtctcggaaatccgg
cccgatgttcagtatcacgtggatttccgggccgtcaacggccaagccttccaattgcgc
gtgttcttaccgcccgggtttcctagtcaacgtccggatatggctttaagcccgccgggc
tcccacccttggctggatcagtcgggccaagtcgtgggcgcccctgggctgctcaactac
tcggtcttgtccgatttgggacgagtggtgcaagccatcaagcgggaattggagaagaac
ccgcccaaagtctcgactagcgggccggagtccaagacttcacccgaacagccgctcgga
gccgtgagtcgggtcagtcggccgacgcccgtgatatcggtcattccgggactgagtgat
ttgagcccggaggagttgactgagctctcggaaagtgatatcgccttgagacatttctgt
cagactatgcctaatccggatttggatgcgctgaacctgaccctggaacagacccgcgag
cgaattcagactttagcccacgacaaccaaaacttgggtcagagccttcaagaccaaaaa
gatcgaatctccgaggccattcagccttggtcaaaagttcgagatgagttaagcgccgcc
ctccctgaatgtgcggcatcgcgtcagaaagtgaatcttccgacgttggtggagagattg
gctcaagccagcgtccagtccgaagaggacagcgaagccatggccgagaagttccaggcg
ggcgacatgagcgtggagacattcatgaaagagttcgtagcctcgcgatcggcctaccat
ttacgccgaaccaagttagacaagctccgtacctattgccgttcagccaaaaactga
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