Tigriopus californicus (tidepool copepod): 131888250
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Entry
131888250 CDS
T09700
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00450
Selenocompound metabolism
tcf00970
Aminoacyl-tRNA biosynthesis
tcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
131888250
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131888250
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tcf01007
]
131888250
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcf03016
]
131888250
Enzymes [BR:
tcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
131888250
Amino acid related enzymes [BR:
tcf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
131888250
Transfer RNA biogenesis [BR:
tcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
131888250
Prokaryotic type
Other AARSs
131888250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1
DUF7140
Motif
Other DBs
NCBI-GeneID:
131888250
NCBI-ProteinID:
XP_059093037
LinkDB
All DBs
Position
10:complement(12652896..12655016)
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AA seq
636 aa
AA seq
DB search
MVSKQKGENERLKVEDTQDTSKDPPVTAEELQSALRNFITLDAEQRKPPVSKPKPYLPES
KANGRRNVLVTSALPYVNNVPHLGNIVGCVLSADVFARFCRLRNYNTLYICGTDEYGTST
ETKALKEGLTPQEICDKYHKLHADIYRWFNIAFDHFGRTTTQQQTEVAQDIFWSLHKAGN
LLEDAIDQLYCEKCEKFLADRFVEGVCPMCGFDDARGDQCDACGKLINAPDLIKPRCKIC
STAPKIKQSRHIFLDLPKIEPELDKWLTEASKSWTNNARVIARSWLKGGLQPRCITRDLK
WGTPVPMKGYEDKVFYVWYDAPIGYISITANYTKDWEKWWKNPDEVEHYEFMAKDNVPFH
SVIFPACQLGTKQDWTIVNHLMATEYLNYEDAKFSKSRGIGVFGNDAMDTGIPSDIWRFY
LTYIRPENQDSAFQWDDLMLKNNSELLGNLGNFVNRALKFCKENFEGKIVEMKLNLDDQK
FLVLVTRHIKQYVEALEGAKERDAIVQLLSISRLGNQLMQANKPWKLVKSESREDRARAG
TVVSLSVNTACLLSILIEPFIPDIAGTLKKQLNFAPGSAPVLDVHFLCLLKPGHVIGDPA
PMIREIKADEIKALKQKYQGDQESREKTKATKYPGK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgaaacaaaagggtgaaaatgaaagattgaaagtggaagatacccaagacacg
tcgaaggatcctcctgtgaccgccgaggagttgcaatcggctttaaggaattttattaca
ttggatgccgagcaaaggaaaccccctgtgagcaagcccaaaccctatctaccggagtcc
aaagcgaatggcagaaggaatgtcttggtcacttcggctttaccgtatgtgaacaatgtt
cctcatttgggtaatatcgtggggtgtgttctctctgccgatgtatttgctcgcttttgt
cgattgagaaactataacaccctgtacatttgtggaacggatgagtacggtacgtccacg
gagaccaaggcccttaaagaagggttgacccctcaggagatttgtgataagtaccacaag
cttcacgccgatatctaccgatggttcaatatcgcctttgaccattttggtcgaactaca
actcaacaacagacagaggtggctcaggacatattttggagccttcataaggctggaaat
ttgttggaagatgctattgatcagctctattgcgagaagtgtgaaaagttcctggctgac
cgattcgtggaaggagtgtgtcctatgtgcggctttgatgatgcccgaggggatcaatgc
gatgcctgtggcaagctcatcaacgctcctgatctcattaagccacgatgtaaaatctgc
tcgactgcgcctaaaattaagcagagccgacacattttcctcgatctgcccaagattgag
cccgaattagacaaatggttgacggaagcctccaaatcctggaccaataacgctagagtg
attgcaagatcttggttgaaaggaggtcttcaacctagatgtatcactcgtgacttgaaa
tggggaacaccagtccctatgaagggatatgaggacaaggtgttctatgtttggtatgat
gctcccattggatacatcagtatcacggccaattacacgaaagattgggagaagtggtgg
aagaacccggacgaggtcgaacattacgagttcatggccaaagacaacgttccgttccat
tcggtgatcttccctgcttgtcaattgggcaccaagcaggactggacaattgttaaccat
ctcatggccacggaatatttgaactatgaggatgccaaattctctaagagtcgaggaatt
ggcgtctttggcaacgatgccatggacactgggattccaagtgacatctggaggttctac
ctcacctatattcgccccgaaaaccaggactccgcattccagtgggacgatttgatgctc
aagaataactccgagctgttgggcaacttagggaacttcgtgaaccgcgctttgaagttc
tgtaaggaaaactttgagggtaagattgtcgagatgaagctgaacctggatgaccagaaa
ttcctggttttggtcacgcgacatatcaaacaatatgtggaagccttggaaggggccaaa
gagcgggacgccatcgttcaactcttgagcatttctcgtctgggaaatcaactcatgcag
gccaacaaaccctggaaattagtcaagagcgaatcaagagaagatcgagctcgagctgga
accgtggttagcttgagcgtgaacacggcgtgtctcctgtccattttaatcgagccattc
ataccagatattgccggcaccttaaaaaagcaattgaacttcgcaccaggctctgccccg
gttctggatgtccattttttatgtctcttgaaacccgggcatgttattggggatccagct
ccaatgattcgcgagatcaaagccgacgaaatcaaggcactgaaacaaaaatatcagggc
gatcaagagagtcgcgaaaaaaccaaagcgacgaaatatcctggaaaatag
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