Tigriopus californicus (tidepool copepod): 131888316
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Entry
131888316 CDS
T09700
Name
(RefSeq) neurogenic locus Notch protein-like
KO
K02599
Notch 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
131888316
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
EGF_3
EGF_2
Notch
Ank_5
Ank_4
Ank_3
NODP
NOD
EGF_Epiregulin
Motif
Other DBs
NCBI-GeneID:
131888316
NCBI-ProteinID:
XP_059093133
LinkDB
All DBs
Position
10:11263016..11286003
Genome browser
AA seq
2556 aa
AA seq
DB search
MSRGQFPGLFGLGPSVISFILLILCALTSSVEGFVSCSPNPCENGALCIRSSLGNSYCDC
PSDYVGEYCQYKNPCTSGGQKCQNGGTCNVLMSTTRGPTFQCSCPIGYSASFCEIAVPSN
ACNNNPCRNGGTCSLLSLTKFKCTCPLGWKGVHCTEKDHCAGNPCHNGDCISLSNSYRCN
CHDGFNGPDCKIDVNECRRNPCYNGRCINTHGSYRCRCDEGFAGQNCENVFYPCNPSPCE
NGGRCIDMDNFQYQCSCPIGFGGERCEVNIDDCAGNLCQNGGRCIDGIGTYTCECSSEYT
GEYCSEDVDECALHPDICQNGATCANTNHGYSCICVNGYNGTNCENNVNDCSQMPCLGGG
TCHDRVANYYCECPPGKTGLLCHLNDACASNPCNAGAICETDIVTGGYKCSCLKGFVGDE
CNQDINECNEGSPCEHDGKCVNTPGSYRCDCAPGFTGPRCEVNINECDSNPCQNEGTCID
ERGGFRCICMPGYAGPHCETDEDECASHPCRNGGICTDLINSYRCTCPNGFKGQNCETNV
DECENSPCRNGGTCRDSFASFSCDCPVGFSGKFCEVNRNDCASNPCRNGRCIDGDNSFLC
ECNPGYTGYLCEKQVNECDSNPCQHGAKCEDLNNGYQCRCLKGTWGQNCENNINECYSNP
CLNGECIDGINSYECHCRPGYMGVNCESEIDECLSQPCLNQGECIDMVGSFKCNCPRGYY
GPRCQSDVNECANNPCRNSGTCENGFNEFICQCKPGYEGKRCEHEVDYCKSNPCQHGGIC
RSHFNAYSCQCPEGYTGKNCETNIDDCQLQPCRNGGTCIDHINDFKCVCEPPFTGKTCEV
EMDPCSPSKCANGATCSPSSNYRDYFCSCPLGFTGRHCDIDIDECLNRPCRNGATCINTD
GSYKCECQPGFEGRDCLLNSDDCANSPCKNGGTCIDGIDSFKCVCVDGFGGDLCQKDIDE
CAANPCLNGATCHDYVNSFTCECRSGFSGTHCEINDEDCTQSSCMNGGTCIDGINSFNCV
CPQDYTGAYCQSSINQCDKNPCHHGGTCVDHDGFYKCHCPSGRTGSNCEELVNWCNEKPC
ENGARCSQVGTSYQCDCLDGWTGKVCDVRQVSCSVAARLRKVSQENLCQNGGHCREIGNS
HECLCSEGYYGSYCQNEVNECLSQPCQNGATCKDLIGTHQCACPPGFQGKNCEFNIDDCD
PNPCQNNGLCHDLVNDFRCSCPHGTEGILCEINKDECFEGACHHGGTCLDKIGAYECRCR
PGFVGPRCEGDVNECLSSPCSPLGTKECIQLVNNYQCNCKPGWQGRHCETKRNFCQHSPC
QNGGACSNTGSGHHCICPRGFYGANCEFSGKSCDSSPCHNGGTCVDGNSGYTCICSHGTS
GKQCEKDNLNECQYSPCLKGTCIDKLGDFDCNCYQGWRGKNCEINDPTSKGGVDMVNPNI
IWDVGAEKLKCEQNKCSLKKGDNICNEECNNQFCDYDGGDCRIGLNPWKNCNATSRGKKC
WEVFQDGFCDESCNSKDCLFDGRDCDSSVMECNPTYDVFCTEHFGNNHCDQRCNNAACGW
DGLDCEAPTERSQIIPGSFYVVLAMNMDSFNEEMQKRFERYLSLVMRTNFKIKRDENGKS
MVQPFDPAALESVNYAYNIGSQPNMIAGYFGIIVYLEIDNVKCQEETGEHCFDTAEGYAN
LISAMIGAEKLSDDWGIVEIGAGDEGRGGNQGNSEVTGVVIGVTILALIVVVLGVITQTN
KRKAKGITWFPEGFMNAAGATALRPGKRGADGQEMFGVGSKYPSTMNMDYPNDGWSDDDP
SEQHPVAKKQRRGEFSSGQTIMTEYDDNDSRQWTQQHLNAADIRNPDILGALTPPQAEIK
PELPNDVDVKGPMGMTPLMIASFRGGGLDTGDIENLEDDDSSPAVIQDLINQGADINTHM
DKTGETPLHLAARYARADAAKKLLDHGADANAQDNTGRSPLHSCVAADAQGVFHILLKNR
ATNLNAKTFDGTTPLILAARLAIEGMVEQLIEADADINLADDNGKTALHWAASVNNVEAV
NVLLANGANRDAQDTKDETPTFLAAKEGSYQAVRALLDHCANRDIQDHMDRLPVHIAQEK
MHHDIVNLLEDHIPPAPQMTSSLHQFSNQHQLLNSPPSGMMGTQSMMGVAKARGKKKPGM
NGSKGSFSPEDLSGMGLNGSTLPKQRKPSLKQKKNEGMGGMLSPDNSSFDAPGGYGHPMA
LSQPNLEEMMASQNGTGVKPPSYEAAVTARSMHTLQGGMPGQSSLESQYSRFNGNASLMG
AQQQQQQQQQQQQTQPHSRQQSMPAAMANYSNNPNLSPPHSNLSGMQSPLSSQANAMSPP
NHGMISPPSSIQSNHNLSPPQSASTQQQQQQQQHQQKQQHQQQQTVQQQDCQGLVGTNTS
PVKSARSIQLPTSPTHMAAMRGATHQRHQGTFDFSHDAAQMAAHFVSPQQQPQQQFMYPT
PPHNNGPHLGDGSSGNILTPSPDSPGQWSSASPQSHSDWSEGVRSPPNNAHFMGITSQQQ
QQQQQHHHHHQQQHQQQQQQQHQQQQLLECVSSILL
NT seq
7671 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaggccaattcccagggctatttggcttgggaccatccgtgatctcattcata
ctgttaattttgtgcgctttaacctcgagcgtcgaaggttttgtttcatgctcacccaat
ccatgtgagaatggagctctatgtattaggagctctcttggaaattcatactgcgattgc
ccttcggactacgtgggcgaatattgtcaatacaagaacccgtgtacatcgggcggacaa
aagtgccagaatggaggcacttgcaacgtcctaatgtccacgacccgaggacccaccttc
cagtgttcgtgtcctattggatactcggccagcttttgcgagattgctgtcccgagtaat
gcctgcaacaataatccctgtcgtaatggtgggacttgctcgttactctccttgaccaaa
ttcaaatgtacttgtcctttgggatggaaaggagttcattgcacggagaaagatcattgt
gcgggtaacccctgccataacggagattgtatttcgttgtcgaactcctatcgctgcaat
tgccatgacggattcaacggacccgattgcaaaatcgacgtgaacgaatgtcggcgaaac
ccgtgctacaatgggcggtgcatcaacacccatggctcttacaggtgccgttgtgacgaa
ggctttgctggtcagaattgtgagaacgtgttctacccttgcaatcccagtccctgcgaa
aatggcggacgctgcattgacatggacaacttccaataccaatgttcctgtccgattggc
tttggcggagagcggtgtgaggtcaatattgatgattgcgctggaaacctttgccaaaac
ggtggaaggtgcattgacgggattggaacttacacgtgtgaatgctcatcagaatacaca
ggggaatattgctcggaagacgtagacgaatgtgctctccatccggatatctgccaaaat
ggggccacttgtgccaacacaaatcatggctactcctgtatttgcgtcaatggctacaat
gggacaaattgcgaaaacaacgtgaacgattgctctcagatgccttgcttgggtggcgga
acatgtcatgatcgggtggccaattactattgtgaatgtccaccaggtaaaaccggtcta
ttgtgccatctgaatgatgcctgtgcttcaaacccgtgcaatgcgggagccatttgcgag
acggatattgtcacgggaggctacaagtgctcctgtctcaagggtttcgtcggcgacgag
tgcaatcaagacatcaacgaatgtaacgaaggatcgccttgcgagcatgatggcaagtgt
gttaatacccccggttcttatcggtgcgattgcgcccctggcttcactggtccccgttgt
gaggtgaacatcaatgagtgcgactcgaacccttgtcaaaatgaaggcacttgtatcgat
gagagaggcggattccgatgcatttgcatgccaggttacgctggacctcattgcgagacc
gacgaagatgaatgcgcttcccatccttgtcgaaatggcggcatttgcacggatttgatc
aacagctatcgatgcacttgtcccaacggatttaaaggacagaactgtgagaccaatgtg
gacgaatgcgaaaacagtccctgtcgaaatgggggaacctgccgcgactcgtttgcctcc
ttctcttgtgattgcccggtgggcttctctgggaagttctgcgaggtcaatcgcaatgat
tgtgccagtaacccgtgtcggaacggccggtgcattgacggggataactcattcttgtgc
gaatgcaacccgggttacactggatacctctgcgaaaagcaagtcaacgaatgtgacagc
aatccatgtcagcacggcgccaagtgcgaggatctcaacaacgggtatcaatgtcggtgt
ctcaagggaacttggggccagaactgcgaaaacaacatcaacgaatgctactccaatccg
tgtctgaatggggagtgcattgacggaatcaatagttacgaatgccattgtcgacctggt
tacatgggtgtcaattgtgagtctgaaatcgacgagtgtctcagccagccttgtttgaac
cagggtgaatgcattgatatggtcggaagtttcaagtgcaattgtcccagaggctattac
ggtcctcgatgccaatccgatgtcaatgaatgtgccaataacccttgccggaatagtgga
acgtgtgagaacggcttcaacgagttcatttgtcagtgcaaaccgggctatgaaggcaaa
cgttgtgagcacgaagtcgattattgtaagtccaatccttgccaacatggtgggatctgt
cggtcccatttcaacgcttactcatgtcagtgcccagagggttacaccggcaagaattgt
gaaactaacatcgacgactgccaactccaaccttgtcgtaatggcggcacctgtatcgat
cacatcaatgacttcaagtgtgtttgtgagccaccatttaccggcaaaacttgtgaggtt
gagatggacccatgttcccccagtaagtgtgcgaatggagctacctgttcaccgtcgtcc
aactatcgagattatttctgctcctgtcctttggggttcaccggacgtcattgcgacatt
gatattgacgaatgtctgaataggccctgccgcaacggagcgacttgcatcaatacagat
ggcagctataaatgtgaatgccagccgggatttgaaggtcgggattgtttattgaattct
gatgattgcgccaactctccttgcaagaatggagggacctgcatcgatggcatcgacagc
tttaaatgtgtttgtgtcgacggattcggaggggatctctgccagaaagacattgacgag
tgtgccgcaaatccgtgcctcaatggagccacttgccacgactacgttaactcgttcact
tgtgaatgccgaagtgggttttccgggactcattgcgaaattaacgatgaggactgcacc
caaagctcctgcatgaatggcggtacttgcatcgacggaattaactctttcaattgtgtt
tgccctcaagactacactggagcctactgtcaatcatcgatcaaccaatgtgacaagaac
ccctgccatcatggcgggacgtgtgttgaccacgatggcttttacaaatgtcattgtcca
agtggaagaactggaagtaattgtgaagaacttgtgaactggtgtaatgagaagccttgt
gagaatggagctcgttgttcccaagttggcacttcttaccaatgcgattgtttggatggt
tggactggcaaggtgtgtgatgtccgacaagtgtcttgttccgttgccgctaggttgcga
aaagtatcccaggaaaatttgtgccagaatggaggccactgccgcgagattggaaatagc
cacgagtgcctctgttcggaaggatactatggatcctactgccagaacgaggtcaatgaa
tgtctctctcagccttgtcagaacggagccacttgcaaagacctcattggaacacaccaa
tgcgcttgtccacccgggttccaaggcaagaattgtgaatttaacatcgatgattgtgac
ccgaacccgtgccagaacaacggcttatgtcatgacttggtcaacgattttagatgctca
tgccctcatggaaccgagggaatcctctgtgaaatcaataaggacgaatgctttgaagga
gcctgccatcatgggggaacttgcttggacaaaatcggtgcctatgaatgtcgttgccgt
ccaggattcgtcggcccgagatgtgagggtgatgtaaatgaatgcctgtctagcccttgc
tcacctttaggaaccaaggaatgcattcaattggttaacaactatcagtgtaactgcaaa
cctggatggcaaggtcgccattgtgagaccaaacgcaatttttgccagcacagtccctgt
caaaatgggggtgcttgctctaatactggatcaggacaccactgcatctgtccccgggga
ttttatggggccaattgtgaattctcaggcaagagttgtgatagctctccctgtcataac
ggtggaacctgcgtggacggaaattcgggatacacctgcatatgttctcacggaaccagt
ggaaagcaatgcgaaaaagacaacttgaatgagtgccagtatagtccttgtctaaaaggg
acctgcatcgataaattgggtgactttgattgcaactgttatcagggatggcgaggcaag
aattgcgaaatcaatgatccaacctctaaagggggcgtcgacatggtcaatcccaacatc
atctgggacgtgggtgccgagaagctcaaatgtgagcaaaataaatgctccctgaagaaa
ggtgacaatatttgcaatgaggaatgcaataaccaattctgcgactatgatggcggggat
tgccgaatcggattgaacccatggaagaattgcaatgctacaagccgtggcaagaagtgt
tgggaagttttccaagacggattttgtgacgagagttgcaacagtaaggattgtcttttt
gatggacgggattgcgattcctccgttatggaatgtaatccgacctacgacgtgttttgt
actgagcacttcggcaacaatcattgcgatcaacgatgtaacaacgccgcatgcggctgg
gatggtctggattgtgaagcccccaccgaacgtagccaaattattcctggcagtttctac
gtggttttagcaatgaatatggattccttcaatgaagagatgcaaaagagattcgaacgc
tacctctcgttggtaatgagaacgaacttcaaaatcaaacgggacgagaacggaaaatcc
atggttcaaccatttgaccctgcggctttggaatccgtcaactatgcttataacattgga
tcccaacccaacatgattgccggttatttcgggatcattgtgtatttggagattgacaac
gtcaaatgccaagaagagacgggagagcactgctttgataccgccgagggttacgcaaac
ttgatttccgccatgattggtgccgaaaagctctccgatgattggggtatcgtagaaatt
ggagctggggatgaaggtcgaggagggaatcaaggaaactccgaggtgactggagtagtc
attggcgtgactatcctggccttgatagtggttgtacttggtgtgatcactcaaaccaac
aagagaaaagccaagggcatcacgtggttccctgaaggattcatgaacgccgcgggagcc
acagctcttcgacctggcaaacgcggagctgatggccaagaaatgttcggtgttggaagc
aagtatccttccacaatgaacatggactatcccaatgatggctggtcagacgatgacccc
agcgaacaacaccctgttgccaagaagcaacgccgtggggaattttcctccgggcagacc
atcatgactgaatatgacgacaatgattctcgacaatggacacaacagcatctcaatgcg
gctgacattcgcaatccggacatcttaggcgcacttacgcccccacaagctgaaatcaaa
cctgaacttcccaacgatgttgacgtcaagggtcccatgggcatgactccacttatgatt
gcctctttccgtggaggtggattagacacgggtgacattgagaacctcgaagatgatgac
tcctcgcctgcagtaatccaagacttgattaatcaaggtgcagatatcaacactcatatg
gacaagactggagagactccattgcatttagccgctagatacgctagagccgatgctgcc
aagaaacttttggaccacggtgcggatgccaatgctcaagataatactggacgctctcca
ttgcattcatgcgtcgctgccgatgcccaaggagttttccatatcctcctgaagaaccga
gccacaaatcttaacgcaaagacttttgacggtacgacccctttgatcttggctgctcgc
ttggccattgaaggcatggtcgagcaactgatcgaggccgatgcggatatcaacttggcc
gacgacaacggaaaaactgcccttcattgggccgcttccgtgaacaatgtggaagcagta
aatgttcttttagccaatggagcaaatcgagacgcccaagatacgaaggacgagacgcct
actttcttggcggccaaggaaggaagctatcaagccgttcgcgctcttttagaccattgt
gccaatcgtgacattcaagatcatatggaccgtctgcctgtgcatattgcccaagaaaag
atgcatcatgacattgtgaacttacttgaagaccatattcctccagctcctcagatgacc
tcgtcgttacatcaattttccaaccaacatcagctgctcaactcacctccaagtggaatg
atgggaactcaaagcatgatgggtgtggccaaagctcgaggaaagaaaaagcctggtatg
aacggctccaaaggctcttttagccctgaagacctgagcggaatgggactgaacggttcc
acgttgcccaagcagaggaaacccagtctaaaacagaagaaaaatgaaggcatgggaggt
atgttgtctccggataactcctctttcgatgctccaggaggctatggacatccaatggca
ctctcacagcctaacttggaagaaatgatggcttctcaaaacggaacaggggtcaaacct
ccgagttacgaggcggcggtgacagcgcgatccatgcacaccctccaaggtggaatgcct
ggccaatctagtctggaatctcaatattccagattcaacggtaacgccagcttgatgggc
gctcagcagcaacaacaacagcagcaacaacagcaacagactcagcctcattcccgtcag
cagtccatgcccgcagccatggccaactatagcaacaatcccaatttgtccccacctcat
tccaacttgtctggaatgcaatcccctctctcgtctcaggccaatgccatgtcaccgcct
aaccatgggatgatctctccaccatcctccatccagtccaaccataacctgtctccgcct
caatcagcatccacacagcaacaacaacaacaacaacagcatcagcaaaaacaacaacat
caacaacaacaaacagtacaacaacaagattgccaaggcttggtgggaacaaatacgtct
ccagtcaagtccgcaaggtccattcagttgcccacctcgcccacccatatggctgctatg
cgaggtgccacccatcaacgccatcagggcacgtttgatttctcccatgatgccgctcaa
atggcggcacactttgtcagtccacaacagcagccccaacaacagttcatgtatcctact
cctccccacaataacggtcctcatctgggggatggatcctcgggcaacattctaactcca
agcccagactcccctgggcaatggagctcggccagtccacaatctcactcggattggtct
gagggcgtacgatcgcctcccaacaatgctcatttcatgggaatcacctctcagcagcag
caacaacaacaacagcaccatcatcatcatcagcaacaacaccaacaacaacaacaacaa
caacatcaacaacaacaattgttggaatgtgtgtcttcgatcctcctctaa
DBGET
integrated database retrieval system
