Tigriopus californicus (tidepool copepod): 131888358
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Entry
131888358 CDS
T09700
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00061
Fatty acid biosynthesis
tcf00071
Fatty acid degradation
tcf01100
Metabolic pathways
tcf01212
Fatty acid metabolism
tcf04146
Peroxisome
Module
tcf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131888358
00071 Fatty acid degradation
131888358
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131888358
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tcf01004
]
131888358
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131888358
Enzymes [BR:
tcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
131888358
Lipid biosynthesis proteins [BR:
tcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131888358
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of breast milk
131888358
Exosomal proteins of breast cancer cells
131888358
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
131888358
NCBI-ProteinID:
XP_059093183
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Position
10:9428713..9431875
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AA seq
725 aa
AA seq
DB search
MMATQGVAPMEGRDEKAPKGWLDKCKYALLKLVVVMIYVVSHLYDYAFYPVYFFYYHPWR
VRRYQKSTHARREDLEREAVIFHSLTEPTQVNQEMLDHGLQTMEQVFNHISKKYGSQDCL
GTRQILGEEEEPQPNGKTFVKYVLGRYEWRSFNQVEEEVRRVADGLRAQGLHHGTRVAIL
CETRAEWMIMANACFQNNATVVTLYTNLGNDGVIHAINETEAAAVVCSQDTVSKIQEILP
KCPHLQTVILMKALAPKSMHNVKLGACKVVRYHELVQGVPSDHVPPRKPPQANDCAIIMY
TSGSTGNPKGVMLSHKNLLSSMTALINIAQFRPGDRYIAYLPLAHVLELLAETSCLMYGI
KIGYSSAATLTNKSTKVKAGCKGDANVLRPTLMCSVPMVLERIYKSIVDTMKRQGWAAEE
LFEYLMQYKMKWEDRGFDTPLLNKTLFRKIRYFLGGRVRLMLSGGAPLSSDTHNLTRTCI
CVPLMQGYGLTETTACATVTNPKDRTTGRVGAPLMGIKIKLVNWDEGNYLISDEPHPRGE
IHVGGDNVALGYFKMEEKTNEDFYEKNGVRWFKTGDIGEVHADGVLKIIDRKKDLIKLQH
GEYVSYGKVESVLKTCPIVENICLVGDSSKDYVIAVVLPDKTKLNSITPKSLPECVQDEK
VLAQILKEIQTFGKSNDLNKVELPAKIVLAQDEWTPESGMVTAAFKIRRRQITQKYEKEI
SKIYK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaacccaaggcgtggcaccaatggaggggagggacgagaaggccccgaagggc
tggctcgataaatgcaagtacgccctactcaaactggtggtggtcatgatctacgtggtg
agccacttgtacgactacgccttctacccagtgtatttcttctactaccatccgtggcgg
gtgcggcgttaccagaagtccacgcacgcccgccgggaagacctggagcgcgaggccgtc
atcttccacagcctcaccgagcccacccaagtcaaccaagagatgctggatcacggactc
caaaccatggagcaagtctttaaccacatttcgaaaaaatacggatctcaggattgtctg
ggtacccggcaaatcttgggcgaagaggaagagccccagcccaatggcaagacctttgtg
aagtatgtcctcggccgatatgagtggcgatcgttcaatcaggtggaggaggaggttcga
cgggtggccgatggattgcgagcgcaaggcttacaccatggcacacgcgttgccattttg
tgcgagacacgggccgaatggatgataatggccaatgcttgcttccaaaataacgccacg
gtggtcacactgtatacgaatttggggaatgatggagtcattcacgccatcaacgaaacc
gaagccgctgctgtggtttgttcccaagatactgtttcgaagatccaagagatcctgccc
aaatgccctcaccttcaaacggtcattctgatgaaggctctggcccccaagtccatgcat
aacgtcaaacttggtgcctgtaaagtggtccgatatcacgagttggttcagggagtcccg
tccgaccatgttccacctcgtaagccccctcaagccaatgattgcgccatcatcatgtac
acaagtggatccacgggcaatcccaaaggtgtaatgttaagccacaaaaatctcctaagt
tctatgacggccttgatcaatatcgctcaatttcgtccgggagaccgttacatcgcttat
ctgccattggcccacgtattggaactcttggccgaaacctcgtgtctgatgtacgggatc
aaaattggctacagctccgctgccacgctcaccaacaaaagcaccaaagtgaaggccggt
tgcaagggtgatgctaatgttttgcgacccacattgatgtgctctgtccctatggtcttg
gagcgcatttacaagagcatcgtggacactatgaaacgtcaaggctgggcggccgaagag
ctctttgaatacttgatgcagtataagatgaaatgggaagaccgtggctttgatactccg
ctcctcaacaagaccttgttccgtaagattcgttatttcctgggggggcgagtccgcttg
atgctctctgggggagcgcctttgtcctcagacacgcataatctgaccagaacttgtatt
tgtgtccctctaatgcaaggctatggtctgacggagacgacggcttgtgctactgtgacc
aatcctaaagatcgaactacggggcgcgttggagcaccattaatgggcattaagattaaa
ctggtcaattgggacgagggaaactacctgatcagcgatgagcctcatccaagaggagag
atccatgttggtggagataatgtggctttgggatatttcaaaatggaggaaaaaacgaac
gaagacttttacgagaagaacggcgtaaggtggtttaagacgggagacataggagaggtc
catgctgatggagttctgaagatcattgatcgaaaaaaggatctcattaagttgcaacat
ggcgagtatgtttcttatggcaaggtggaaagcgtcttaaaaacatgtcctattgttgaa
aacatctgcttggtcggagactcttccaaagactacgttattgctgtggtccttccggat
aaaactaagttgaacagcatcactcctaaatccttgccagaatgcgttcaagatgagaag
gttttggcacaaattctcaaggagatccaaacattcggcaaatccaatgatctgaataaa
gttgaattacccgccaaaatcgttttggcccaagatgagtggaccccagaatcaggaatg
gttactgcggccttcaaaattcggagacgtcaaattacccaaaaatacgaaaaggaaatt
tcaaagatatataaatga
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